Variant report

Variant	rs28465275
Chromosome Location	chr4:149945936-149945937
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10489054	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17725791	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs28394720	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28417942	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28478129	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28491207	0.80[AFR][1000 genomes]
rs28498848	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28557410	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28636985	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28787362	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28860488	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs66979066	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67997931	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72719869	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs756862	0.86[AFR][1000 genomes]
rs9992331	0.95[AFR][1000 genomes]
rs9994141	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:149945400-149946000	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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