The 2.0 version of rSNPBase

Variant report

Variant rs28479967
Chromosome Location chr15:49491143-49491144
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49463200-49508200 Weak transcription Ovary ovary
2 chr15:49463600-49494400 Weak transcription Fetal Thymus thymus
3 chr15:49463600-49517600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr15:49463600-49527800 Weak transcription HSMM muscle
5 chr15:49463600-49540200 Weak transcription Colonic Mucosa Colon
6 chr15:49464000-49491600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr15:49464400-49493800 Weak transcription Primary T cells fromperipheralblood blood
8 chr15:49464400-49493800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr15:49464400-49500000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr15:49465200-49494000 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr15:49465400-49508200 Weak transcription Hela-S3 cervix
12 chr15:49467600-49494200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr15:49468400-49494400 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr15:49472800-49497200 Weak transcription Brain Anterior Caudate brain
15 chr15:49478000-49493800 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr15:49478000-49494400 Weak transcription Primary hematopoietic stem cells blood
17 chr15:49478000-49496000 Weak transcription Primary T cells from cord blood blood
18 chr15:49478400-49497400 Weak transcription Primary B cells from cord blood blood
19 chr15:49480000-49510600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr15:49480200-49494200 Weak transcription Fetal Intestine Small intestine
21 chr15:49480200-49494400 Weak transcription Lung lung
22 chr15:49480200-49500200 Weak transcription Spleen Spleen
23 chr15:49480200-49502000 Weak transcription Aorta Aorta
24 chr15:49480200-49503800 Weak transcription Esophagus oesophagus
25 chr15:49480400-49491200 Weak transcription NHDF-Ad bronchial
26 chr15:49480600-49491200 Weak transcription NHLF lung
27 chr15:49480600-49491400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr15:49480600-49491600 Weak transcription Osteobl bone
29 chr15:49480600-49503800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr15:49480800-49491200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr15:49481600-49498600 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr15:49482200-49494000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr15:49483000-49491200 Weak transcription Adipose Nuclei Adipose
34 chr15:49483200-49494200 Weak transcription Primary monocytes fromperipheralblood blood
35 chr15:49483400-49493600 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr15:49483600-49497000 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr15:49484000-49494000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr15:49484200-49519400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr15:49484400-49494200 Weak transcription Duodenum Mucosa Duodenum
40 chr15:49484400-49497000 Weak transcription Fetal Brain Male brain
41 chr15:49485200-49494200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr15:49487000-49510600 Weak transcription Thymus Thymus
43 chr15:49487200-49494600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr15:49487200-49531200 Weak transcription HMEC breast
45 chr15:49487400-49493400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr15:49488200-49492800 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr15:49488600-49493800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr15:49488600-49494000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr15:49488800-49494400 Weak transcription Fetal Intestine Large intestine
50 chr15:49488800-49496200 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015