The 2.0 version of rSNPBase

Variant report

Variant rs28484999
Chromosome Location chr16:80660388-80660389
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:80630600-80668000 Weak transcription Fetal Kidney kidney
2 chr16:80634200-80663600 Weak transcription Brain Anterior Caudate brain
3 chr16:80640600-80662200 Weak transcription Primary T cells from cord blood blood
4 chr16:80640600-80662600 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr16:80640800-80663800 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr16:80640800-80669200 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr16:80642200-80668200 Weak transcription Brain Inferior Temporal Lobe brain
8 chr16:80642800-80663800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr16:80644200-80666200 Weak transcription Brain Substantia Nigra brain
10 chr16:80646400-80662200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr16:80646400-80662200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr16:80646600-80687800 Weak transcription Pancreas Pancrea
13 chr16:80647000-80665000 Weak transcription Gastric stomach
14 chr16:80650000-80661800 Weak transcription Muscle Satellite Cultured Cells --
15 chr16:80653200-80668200 Weak transcription Primary T cells fromperipheralblood blood
16 chr16:80653600-80662200 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr16:80653600-80666800 Weak transcription Esophagus oesophagus
18 chr16:80653600-80667400 Weak transcription Fetal Stomach stomach
19 chr16:80653800-80662000 Weak transcription Duodenum Mucosa Duodenum
20 chr16:80654400-80662000 Weak transcription Liver Liver
21 chr16:80654400-80667800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr16:80654400-80668800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr16:80654800-80662200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr16:80655000-80661800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr16:80655000-80662400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr16:80657200-80668000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr16:80658000-80661600 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr16:80658000-80667200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr16:80658000-80668200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr16:80658200-80661800 Weak transcription Aorta Aorta
31 chr16:80658200-80662000 Weak transcription Spleen Spleen
32 chr16:80658400-80666600 Weak transcription HUVEC blood vessel
33 chr16:80658800-80668200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr16:80659800-80661400 Weak transcription Hela-S3 cervix
35 chr16:80660000-80668800 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr16:80660200-80662000 Weak transcription Placenta Placenta
37 chr16:80660200-80666800 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015