The 2.0 version of rSNPBase

Variant report

Variant rs28493912
Chromosome Location chr5:74967164-74967165
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:74952800-74981400 Weak transcription Psoas Muscle Psoas
2 chr5:74960200-74968600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr5:74961000-74976800 Weak transcription Colon Smooth Muscle Colon
4 chr5:74961000-74987800 Weak transcription Placenta Amnion Placenta Amnion
5 chr5:74961200-74968000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr5:74962000-74979400 Weak transcription H1 Cell Line embryonic stem cell
7 chr5:74963000-74989800 Weak transcription Esophagus oesophagus
8 chr5:74963200-74976600 Weak transcription HMEC breast
9 chr5:74963400-74968600 Weak transcription Fetal Lung lung
10 chr5:74963400-74968600 Weak transcription Ovary ovary
11 chr5:74963800-74968200 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr5:74964000-74968200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr5:74964400-74967400 Enhancers Fetal Kidney kidney
14 chr5:74964600-74970800 Weak transcription Stomach Smooth Muscle stomach
15 chr5:74964800-74989400 Weak transcription HSMMtube muscle
16 chr5:74965000-74968400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr5:74965000-74968400 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr5:74965000-74968800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr5:74965000-74976600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr5:74965000-74977000 Weak transcription Brain Angular Gyrus brain
21 chr5:74965000-74978600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr5:74965000-74979800 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr5:74965000-74983800 Weak transcription Brain Cingulate Gyrus brain
24 chr5:74965000-74991200 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr5:74965000-74998000 Weak transcription Fetal Brain Female brain
26 chr5:74965200-74968200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr5:74965200-74968200 Weak transcription Brain Substantia Nigra brain
28 chr5:74965200-74968400 Weak transcription Fetal Muscle Trunk muscle
29 chr5:74965200-74968400 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr5:74965200-74977000 Weak transcription NHLF lung
31 chr5:74965200-75011800 Weak transcription Brain Germinal Matrix brain
32 chr5:74965400-74967800 Enhancers Muscle Satellite Cultured Cells --
33 chr5:74965400-74968000 Weak transcription Placenta Placenta
34 chr5:74965400-74968200 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr5:74965400-74968200 Weak transcription Fetal Muscle Leg muscle
36 chr5:74965400-74968200 Weak transcription Left Ventricle heart
37 chr5:74965400-74968400 Weak transcription Adipose Nuclei Adipose
38 chr5:74965400-74968400 Weak transcription Fetal Stomach stomach
39 chr5:74965400-74968400 Weak transcription Fetal Thymus thymus
40 chr5:74965400-74968600 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr5:74965400-74969000 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr5:74965400-74969200 Weak transcription Aorta Aorta
43 chr5:74965400-74969800 Weak transcription Primary B cells from cord blood blood
44 chr5:74965400-74969800 Weak transcription Thymus Thymus
45 chr5:74965400-74970200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr5:74965400-74970200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr5:74965400-74970600 Weak transcription Brain Hippocampus Middle brain
48 chr5:74965400-74977000 Weak transcription Brain Inferior Temporal Lobe brain
49 chr5:74965400-74977000 Weak transcription NH-A brain
50 chr5:74965400-74978000 Weak transcription Rectal Smooth Muscle rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015