The 2.0 version of rSNPBase

Variant report

Variant rs28507738
Chromosome Location chr4:57917643-57917644
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57898800-57917800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr4:57899400-57925000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr4:57899600-57942200 Weak transcription Primary hematopoietic stem cells blood
4 chr4:57904800-57922200 Weak transcription Brain Cingulate Gyrus brain
5 chr4:57910400-57921200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr4:57911800-57919600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr4:57912000-57920200 Weak transcription Aorta Aorta
8 chr4:57913000-57921200 Weak transcription Fetal Stomach stomach
9 chr4:57913000-57922000 Weak transcription NHLF lung
10 chr4:57913000-57922600 Weak transcription Ovary ovary
11 chr4:57914000-57919600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr4:57914200-57918000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr4:57914600-57918000 Enhancers HUVEC blood vessel
14 chr4:57915000-57918400 Enhancers Skeletal Muscle Male skeletal muscle
15 chr4:57915000-57921200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr4:57915200-57922400 Weak transcription Brain Hippocampus Middle brain
17 chr4:57915400-57923600 Weak transcription HSMM muscle
18 chr4:57915600-57922600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr4:57915600-57923000 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr4:57915600-57924200 Enhancers Left Ventricle heart
21 chr4:57915800-57930200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr4:57916000-57918000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr4:57916000-57918400 Weak transcription Muscle Satellite Cultured Cells --
24 chr4:57916000-57919400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr4:57916000-57919400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr4:57916000-57919400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr4:57916000-57919400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr4:57916000-57919400 Weak transcription HMEC breast
29 chr4:57916000-57919600 Weak transcription A549 lung
30 chr4:57916000-57922000 Weak transcription Brain Anterior Caudate brain
31 chr4:57916200-57918000 Weak transcription NHEK skin
32 chr4:57916400-57918600 Enhancers Primary monocytes fromperipheralblood blood
33 chr4:57916600-57918000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr4:57916600-57919000 Enhancers Skeletal Muscle Female skeletal muscle
35 chr4:57916600-57919400 Strong transcription Osteobl bone
36 chr4:57916800-57918200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr4:57916800-57919000 Enhancers Right Atrium heart
38 chr4:57917000-57917800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr4:57917000-57918000 Enhancers Liver Liver
40 chr4:57917000-57918600 Genic enhancers HSMMtube muscle
41 chr4:57917200-57917800 Enhancers Colon Smooth Muscle Colon
42 chr4:57917200-57917800 Genic enhancers Fetal Kidney kidney
43 chr4:57917200-57918600 Enhancers Stomach Smooth Muscle stomach
44 chr4:57917200-57918800 Enhancers Adipose Nuclei Adipose
45 chr4:57917400-57917800 Weak transcription Fetal Heart heart
46 chr4:57917400-57918000 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr4:57917400-57918000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
48 chr4:57917400-57918600 Enhancers Fetal Muscle Leg muscle
49 chr4:57917400-57918600 Enhancers Lung lung
50 chr4:57917400-57919000 Enhancers Spleen Spleen

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Last update: Aug 31, 2015