The 2.0 version of rSNPBase

Variant report

Variant rs2852699
Chromosome Location chr1:159018359-159018360
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:158980200-159025400 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:158982600-159027400 Weak transcription Fetal Kidney kidney
3 chr1:158984200-159024200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:158984800-159027400 Weak transcription Psoas Muscle Psoas
5 chr1:158985400-159023800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:158988600-159024000 Strong transcription Primary hematopoietic stem cells short term culture blood
7 chr1:158993000-159023200 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr1:158998400-159024000 Strong transcription Primary monocytes fromperipheralblood blood
9 chr1:158998800-159033800 Weak transcription Fetal Brain Female brain
10 chr1:158999000-159022800 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr1:158999200-159023800 Strong transcription Duodenum Smooth Muscle Duodenum
12 chr1:159000000-159026200 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr1:159000400-159024200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr1:159000600-159020200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:159000600-159023800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:159001000-159027400 Weak transcription Right Ventricle heart
17 chr1:159001400-159020200 Weak transcription Brain Anterior Caudate brain
18 chr1:159001400-159020200 Weak transcription Gastric stomach
19 chr1:159001400-159024200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:159001400-159036200 Weak transcription Small Intestine intestine
21 chr1:159001600-159028400 Strong transcription Fetal Thymus thymus
22 chr1:159003000-159022000 Weak transcription Fetal Brain Male brain
23 chr1:159003400-159021400 Weak transcription Rectal Smooth Muscle rectum
24 chr1:159003400-159021400 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr1:159004600-159022800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:159004800-159020200 Weak transcription Colonic Mucosa Colon
27 chr1:159005400-159023200 Weak transcription Brain Cingulate Gyrus brain
28 chr1:159005600-159027200 Weak transcription Brain Angular Gyrus brain
29 chr1:159006800-159024200 Weak transcription Brain Inferior Temporal Lobe brain
30 chr1:159007200-159026800 Weak transcription Pancreas Pancrea
31 chr1:159009000-159023000 Weak transcription Fetal Muscle Trunk muscle
32 chr1:159009000-159026400 Strong transcription Dnd41 blood
33 chr1:159009200-159030400 Weak transcription Stomach Smooth Muscle stomach
34 chr1:159009400-159020200 Weak transcription Fetal Intestine Small intestine
35 chr1:159010600-159023800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:159010600-159026400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:159011200-159020400 Weak transcription Aorta Aorta
38 chr1:159011400-159020000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:159011400-159022800 Strong transcription Primary B cells from peripheral blood blood
40 chr1:159011400-159023800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:159011400-159024000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr1:159011600-159023800 Strong transcription Osteobl bone
43 chr1:159011800-159020000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:159012200-159020200 Weak transcription Fetal Muscle Leg muscle
45 chr1:159012200-159020200 Weak transcription Left Ventricle heart
46 chr1:159012800-159020200 Weak transcription Spleen Spleen
47 chr1:159013000-159020200 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr1:159013000-159020400 Weak transcription Fetal Stomach stomach
49 chr1:159013000-159025600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr1:159013200-159020200 Weak transcription Lung lung

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Last update: Aug 31, 2015