The 2.0 version of rSNPBase

Variant report

Variant rs1633262
Chromosome Location chr1:159004888-159004889
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:158980200-159025400 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:158982600-159027400 Weak transcription Fetal Kidney kidney
3 chr1:158984200-159024200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:158984800-159027400 Weak transcription Psoas Muscle Psoas
5 chr1:158985400-159023800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:158985800-159005000 Weak transcription Brain Angular Gyrus brain
7 chr1:158986000-159016200 Weak transcription Stomach Mucosa stomach
8 chr1:158988200-159016600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:158988600-159024000 Strong transcription Primary hematopoietic stem cells short term culture blood
10 chr1:158993000-159023200 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr1:158996400-159009800 Strong transcription GM12878-XiMat blood
12 chr1:158997600-159017000 Strong transcription Primary B cells from cord blood blood
13 chr1:158998400-159008400 Strong transcription HSMM muscle
14 chr1:158998400-159008400 Strong transcription Osteobl bone
15 chr1:158998400-159008800 Strong transcription Muscle Satellite Cultured Cells --
16 chr1:158998400-159024000 Strong transcription Primary monocytes fromperipheralblood blood
17 chr1:158998600-159014600 Strong transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:158998600-159015600 Strong transcription Primary T helper cells fromperipheralblood blood
19 chr1:158998800-159014000 Strong transcription Primary T cells from cord blood blood
20 chr1:158998800-159033800 Weak transcription Fetal Brain Female brain
21 chr1:158999000-159014400 Strong transcription Fetal Intestine Large intestine
22 chr1:158999000-159022800 Strong transcription Primary neutrophils fromperipheralblood blood
23 chr1:158999200-159023800 Strong transcription Duodenum Smooth Muscle Duodenum
24 chr1:158999400-159013000 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:158999600-159007200 Strong transcription Fetal Lung lung
26 chr1:158999600-159013000 Strong transcription Sigmoid Colon Sigmoid Colon
27 chr1:158999800-159007600 Strong transcription Brain Hippocampus Middle brain
28 chr1:159000000-159005200 Strong transcription Fetal Muscle Leg muscle
29 chr1:159000000-159008800 Strong transcription HSMMtube muscle
30 chr1:159000000-159009000 Strong transcription Placenta Placenta
31 chr1:159000000-159012800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:159000000-159012800 Strong transcription NHEK skin
33 chr1:159000000-159026200 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr1:159000200-159009000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr1:159000200-159009200 Strong transcription Hela-S3 cervix
36 chr1:159000200-159010000 Strong transcription Liver Liver
37 chr1:159000200-159011800 Strong transcription Rectal Mucosa Donor 31 rectum
38 chr1:159000200-159013200 Strong transcription Primary hematopoietic stem cells blood
39 chr1:159000200-159013400 Strong transcription Thymus Thymus
40 chr1:159000400-159014000 Strong transcription Duodenum Mucosa Duodenum
41 chr1:159000400-159024200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:159000600-159007400 Strong transcription HMEC breast
43 chr1:159000600-159008600 Strong transcription Dnd41 blood
44 chr1:159000600-159014200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr1:159000600-159020200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:159000600-159023800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:159000800-159008800 Strong transcription Primary T killer naive cells fromperipheralblood blood
48 chr1:159000800-159010800 Strong transcription Primary B cells from peripheral blood blood
49 chr1:159001000-159007200 Strong transcription Primary T helper naive cells from peripheral blood blood
50 chr1:159001000-159008600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015