The 2.0 version of rSNPBase

Variant report

Variant rs1101991
Chromosome Location chr1:158993268-158993269
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:158976000-159000800 Weak transcription Gastric stomach
2 chr1:158980200-159025400 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:158982600-159027400 Weak transcription Fetal Kidney kidney
4 chr1:158982800-159000200 Weak transcription Aorta Aorta
5 chr1:158984000-159000800 Weak transcription Right Ventricle heart
6 chr1:158984200-159024200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr1:158984400-158995200 Strong transcription Fetal Intestine Large intestine
8 chr1:158984800-159027400 Weak transcription Psoas Muscle Psoas
9 chr1:158985400-159023800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:158985600-158995200 Strong transcription Thymus Thymus
11 chr1:158985800-158994400 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr1:158985800-158995200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:158985800-159005000 Weak transcription Brain Angular Gyrus brain
14 chr1:158986000-158994000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:158986000-158995000 Strong transcription HSMM muscle
16 chr1:158986000-158995200 Strong transcription Osteobl bone
17 chr1:158986000-159016200 Weak transcription Stomach Mucosa stomach
18 chr1:158987000-158995000 Strong transcription HUVEC blood vessel
19 chr1:158987000-158995200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:158987000-159000200 Weak transcription Brain Substantia Nigra brain
21 chr1:158987000-159000400 Weak transcription Fetal Muscle Trunk muscle
22 chr1:158987200-158996200 Strong transcription Primary hematopoietic stem cells blood
23 chr1:158987200-158998400 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:158987200-159000000 Weak transcription Small Intestine intestine
25 chr1:158987200-159000200 Weak transcription Stomach Smooth Muscle stomach
26 chr1:158987200-159000400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:158987200-159001200 Strong transcription Fetal Thymus thymus
28 chr1:158987600-158996400 Strong transcription Primary monocytes fromperipheralblood blood
29 chr1:158987800-158993400 Weak transcription Fetal Intestine Small intestine
30 chr1:158987800-159000200 Weak transcription Esophagus oesophagus
31 chr1:158988000-158993400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr1:158988000-158993600 Strong transcription Primary T cells fromperipheralblood blood
33 chr1:158988000-158995200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:158988000-159002200 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr1:158988200-158993400 Weak transcription Lung lung
36 chr1:158988200-158993600 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr1:158988200-159000000 Weak transcription HSMMtube muscle
38 chr1:158988200-159000200 Weak transcription Left Ventricle heart
39 chr1:158988200-159016600 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:158988400-158993400 Strong transcription Primary B cells from peripheral blood blood
41 chr1:158988400-159002400 Weak transcription Fetal Brain Male brain
42 chr1:158988600-158993600 Weak transcription Colon Smooth Muscle Colon
43 chr1:158988600-158995600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr1:158988600-159024000 Strong transcription Primary hematopoietic stem cells short term culture blood
45 chr1:158988800-158993400 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr1:158988800-158993400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:158988800-158994000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr1:158988800-158994800 Weak transcription Ovary ovary
49 chr1:158988800-158999000 Genic enhancers Dnd41 blood
50 chr1:158988800-159000800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015