The 2.0 version of rSNPBase

Variant report

Variant rs66831955
Chromosome Location chr1:158999811-158999812
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:158976000-159000800 Weak transcription Gastric stomach
2 chr1:158980200-159025400 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:158982600-159027400 Weak transcription Fetal Kidney kidney
4 chr1:158982800-159000200 Weak transcription Aorta Aorta
5 chr1:158984000-159000800 Weak transcription Right Ventricle heart
6 chr1:158984200-159024200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr1:158984800-159027400 Weak transcription Psoas Muscle Psoas
8 chr1:158985400-159023800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:158985800-159005000 Weak transcription Brain Angular Gyrus brain
10 chr1:158986000-159016200 Weak transcription Stomach Mucosa stomach
11 chr1:158987000-159000200 Weak transcription Brain Substantia Nigra brain
12 chr1:158987000-159000400 Weak transcription Fetal Muscle Trunk muscle
13 chr1:158987200-159000000 Weak transcription Small Intestine intestine
14 chr1:158987200-159000200 Weak transcription Stomach Smooth Muscle stomach
15 chr1:158987200-159000400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr1:158987200-159001200 Strong transcription Fetal Thymus thymus
17 chr1:158987800-159000200 Weak transcription Esophagus oesophagus
18 chr1:158988000-159002200 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr1:158988200-159000000 Weak transcription HSMMtube muscle
20 chr1:158988200-159000200 Weak transcription Left Ventricle heart
21 chr1:158988200-159016600 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr1:158988400-159002400 Weak transcription Fetal Brain Male brain
23 chr1:158988600-159024000 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr1:158988800-159000800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:158989000-159002400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:158989000-159003000 Weak transcription Colonic Mucosa Colon
27 chr1:158989800-159004200 Weak transcription Brain Cingulate Gyrus brain
28 chr1:158990200-159000200 Weak transcription Brain Anterior Caudate brain
29 chr1:158991000-159000000 Weak transcription Placenta Placenta
30 chr1:158991600-159000200 Weak transcription Liver Liver
31 chr1:158991600-159000200 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr1:158991600-159000200 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr1:158991600-159000400 Weak transcription Duodenum Mucosa Duodenum
34 chr1:158992400-159000200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:158993000-159023200 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr1:158993800-159000600 Weak transcription HMEC breast
37 chr1:158993800-159002000 Weak transcription NH-A brain
38 chr1:158994000-159000200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:158994000-159000800 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr1:158994400-159000000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:158994400-159000000 Weak transcription Adipose Nuclei Adipose
42 chr1:158994400-159000200 Weak transcription Spleen Spleen
43 chr1:158994400-159000400 Weak transcription Colon Smooth Muscle Colon
44 chr1:158994400-159000400 Weak transcription NHDF-Ad bronchial
45 chr1:158994600-159000200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:158994600-159000200 Weak transcription Hela-S3 cervix
47 chr1:158995000-159000000 Weak transcription Fetal Muscle Leg muscle
48 chr1:158995000-159000200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr1:158995200-159000200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:158995200-159000200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015