Variant report

Variant rs28548764
Chromosome Location chr9:140241742-140241743
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140212000-140242200 Weak transcription Fetal Brain Female brain
2 chr9:140215800-140243200 Weak transcription Colonic Mucosa Colon
3 chr9:140234400-140242600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr9:140234400-140249800 Weak transcription Duodenum Mucosa Duodenum
5 chr9:140234600-140249800 Weak transcription Rectal Smooth Muscle rectum
6 chr9:140237400-140247000 Weak transcription Left Ventricle heart
7 chr9:140237600-140242400 Weak transcription Esophagus oesophagus
8 chr9:140238000-140246400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr9:140238800-140242400 Weak transcription Gastric stomach
10 chr9:140238800-140244200 Strong transcription Skeletal Muscle Male skeletal muscle
11 chr9:140239000-140245400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr9:140239200-140242200 Weak transcription Colon Smooth Muscle Colon
13 chr9:140239200-140288800 Weak transcription Placenta Amnion Placenta Amnion
14 chr9:140239400-140250000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr9:140240600-140241800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr9:140240600-140268400 Weak transcription Psoas Muscle Psoas
17 chr9:140240800-140241800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr9:140240800-140241800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr9:140240800-140241800 ZNF genes & repeats Adipose Nuclei Adipose
20 chr9:140240800-140241800 ZNF genes & repeats Liver Liver
21 chr9:140240800-140241800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
22 chr9:140240800-140241800 ZNF genes & repeats Fetal Muscle Leg muscle
23 chr9:140240800-140242000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr9:140240800-140242000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr9:140240800-140242000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
26 chr9:140240800-140242000 ZNF genes & repeats Right Ventricle heart
27 chr9:140240800-140242400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
28 chr9:140240800-140242800 ZNF genes & repeats Aorta Aorta
29 chr9:140240800-140242800 ZNF genes & repeats Fetal Intestine Large intestine
30 chr9:140240800-140242800 ZNF genes & repeats Fetal Intestine Small intestine
31 chr9:140240800-140242800 ZNF genes & repeats Fetal Stomach stomach
32 chr9:140240800-140242800 Strong transcription Pancreas Pancrea
33 chr9:140240800-140243000 Strong transcription Fetal Lung lung
34 chr9:140240800-140243800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
35 chr9:140240800-140247400 Strong transcription Brain Germinal Matrix brain
36 chr9:140241000-140242600 ZNF genes & repeats Lung lung
37 chr9:140241000-140242800 Strong transcription Brain Cingulate Gyrus brain
38 chr9:140241000-140242800 ZNF genes & repeats Spleen Spleen
39 chr9:140241000-140244000 Strong transcription Brain Inferior Temporal Lobe brain
40 chr9:140241000-140244000 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
41 chr9:140241200-140242400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr9:140241200-140242800 Weak transcription Muscle Satellite Cultured Cells --
43 chr9:140241200-140242800 Weak transcription Fetal Brain Male brain
44 chr9:140241200-140242800 Strong transcription Stomach Smooth Muscle stomach
45 chr9:140241200-140244000 Strong transcription Brain Anterior Caudate brain
46 chr9:140241200-140244200 Strong transcription Ovary ovary
47 chr9:140241400-140242800 Strong transcription Brain Angular Gyrus brain
48 chr9:140241400-140243000 Strong transcription Brain Hippocampus Middle brain
49 chr9:140241400-140243400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr9:140241400-140244000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain

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