The 2.0 version of rSNPBase

Variant report

Variant rs59029792
Chromosome Location chr9:140295896-140295897
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140258600-140299400 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr9:140282400-140301200 Weak transcription NHLF lung
3 chr9:140282800-140301600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr9:140283000-140300200 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr9:140284600-140300800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr9:140285600-140300800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr9:140285600-140301000 Weak transcription Brain Cingulate Gyrus brain
8 chr9:140285600-140301000 Weak transcription Psoas Muscle Psoas
9 chr9:140285800-140300800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr9:140285800-140301000 Weak transcription Brain Inferior Temporal Lobe brain
11 chr9:140285800-140301000 Weak transcription Right Atrium heart
12 chr9:140286000-140297200 Weak transcription HSMMtube muscle
13 chr9:140287000-140298200 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr9:140287200-140300800 Weak transcription Adipose Nuclei Adipose
15 chr9:140287200-140301200 Weak transcription Aorta Aorta
16 chr9:140287800-140300800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr9:140288200-140300600 Weak transcription Fetal Brain Female brain
18 chr9:140288400-140300800 Weak transcription Colonic Mucosa Colon
19 chr9:140289600-140300800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr9:140289800-140300800 Weak transcription Gastric stomach
21 chr9:140289800-140300800 Weak transcription Ovary ovary
22 chr9:140289800-140301000 Weak transcription Brain Germinal Matrix brain
23 chr9:140290000-140296600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr9:140290000-140300800 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr9:140291200-140296800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr9:140291200-140296800 Weak transcription Hela-S3 cervix
27 chr9:140291200-140300000 Weak transcription A549 lung
28 chr9:140291400-140300200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr9:140291400-140300800 Weak transcription Esophagus oesophagus
30 chr9:140291600-140301000 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr9:140291800-140300200 Weak transcription Right Ventricle heart
32 chr9:140292200-140301000 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr9:140292400-140298200 Weak transcription Stomach Smooth Muscle stomach
34 chr9:140292400-140300800 Weak transcription Fetal Lung lung
35 chr9:140292600-140297600 Weak transcription Fetal Muscle Trunk muscle
36 chr9:140293000-140301000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr9:140293600-140299400 Weak transcription Spleen Spleen
38 chr9:140293600-140300800 Weak transcription Pancreas Pancrea
39 chr9:140293800-140296600 Weak transcription Fetal Stomach stomach
40 chr9:140293800-140296800 Weak transcription Fetal Muscle Leg muscle
41 chr9:140293800-140297400 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr9:140293800-140297600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr9:140294000-140301000 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr9:140294600-140299800 Weak transcription Primary hematopoietic stem cells blood
45 chr9:140294800-140299400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr9:140294800-140300200 Weak transcription HepG2 liver
47 chr9:140295000-140299600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr9:140295400-140296600 Weak transcription Primary B cells from peripheral blood blood
49 chr9:140295400-140296800 Strong transcription Fetal Intestine Small intestine
50 chr9:140295400-140300800 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015