Variant report

Variant	rs73668298
Chromosome Location	chr9:140336654-140336655
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4)
CpG islands
(count:61)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr9:140336557-140336970	MCF10A-Er-Src	breast:	n/a	n/a
2	NRF1	chr9:140336595-140336654	GM12878	blood:	n/a	n/a
3	POLR2A	chr9:140336442-140336727	HepG2	liver:	n/a	n/a
4	POLR2A	chr9:140336490-140336891	HepG2	liver:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140336654-140336704	HMEC	breast:	n/a
2	chr9:140336654-140336704	SKMC	muscle:	n/a
3	chr9:140336654-140336704	SAEC	small airway:	n/a
4	chr9:140336654-140336704	BE2_C	brain:	n/a
5	chr9:140336654-140336704	SK-N-SH_RA	brain:	n/a
6	chr9:140336654-140336704	NH-A	brain:	n/a
7	chr9:140336654-140336704	HEEpiC	esophagus:	n/a
8	chr9:140336654-140336704	RPTEC	kidney:	n/a
9	chr9:140336654-140336704	GM06990	blood:	n/a
10	chr9:140336654-140336704	HCM	heart:	n/a
11	chr9:140336654-140336704	Caco-2	colon:	n/a
12	chr9:140336654-140336704	ProgFib	skin:	n/a
13	chr9:140336654-140336704	AG04450	lung:	fetal
14	chr9:140336654-140336704	GM12892	blood:	n/a
15	chr9:140336654-140336704	PANC-1	pancreas:	n/a
16	chr9:140336654-140336704	SK-N-SH	brain:	n/a
17	chr9:140336654-140336704	GM12878	blood:	n/a
18	chr9:140336654-140336704	SK-N-MC	brain:	n/a
19	chr9:140336654-140336704	Hela-S3	cervix:	n/a
20	chr9:140336654-140336704	GM12891	blood:	n/a
21	chr9:140336654-140336704	MCF10A-Er-Src	breast:	n/a
22	chr9:140336654-140336704	HCF	heart:	n/a
23	chr9:140336654-140336704	HIPEpiC	eye:	n/a
24	chr9:140336654-140336704	PrEC	prostate:	n/a
25	chr9:140336654-140336704	HepG2	liver:	n/a
26	chr9:140336654-140336704	AG09319	gingival:	n/a
27	chr9:140336654-140336704	PFSK-1	brain:	n/a
28	chr9:140336654-140336704	AoSMC	blood vessel:	n/a
29	chr9:140336654-140336704	NHDF-neo	bronchial:	n/a
30	chr9:140336654-140336704	AG04449	skin:	fetal
31	chr9:140336654-140336704	HPAEpiC	pulmonary alveolar:	n/a
32	chr9:140336654-140336704	HL-60	blood:	n/a
33	chr9:140336654-140336704	HCT-116	colon:	n/a
34	chr9:140336654-140336704	K562	blood:	n/a
35	chr9:140336654-140336704	LNCaP	prostate:	n/a
36	chr9:140336654-140336704	U87	brain:	n/a
37	chr9:140336654-140336704	HNPCEpiC	eye:	n/a
38	chr9:140336654-140336704	GM19239	blood:	n/a
39	chr9:140336654-140336704	HRCEpiC	kidney:	n/a
40	chr9:140336654-140336704	BJ	skin:	n/a
41	chr9:140336654-140336704	HRE	kidney:	n/a
42	chr9:140336654-140336704	AG10803	skin:	n/a
43	chr9:140336654-140336704	HUVEC	blood vessel:	n/a
44	chr9:140336654-140336704	CMK	blood:	n/a
45	chr9:140336654-140336704	ECC-1	luminal epithelium:	n/a
46	chr9:140336654-140336704	IMR90	lung:	fetal
47	chr9:140336654-140336704	HCPEpiC	choroid plexus:	n/a
48	chr9:140336654-140336704	MCF-7	breast:	n/a
49	chr9:140336654-140336704	ovcar-3	ovarian:	n/a
50	chr9:140336654-140336704	T-47D	breast:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:140189146..140192137-chr9:140333598..140337290,3	K562	blood:
2	chr9:140336000..140341073-chr9:140346212..140348839,4	MCF-7	breast:
3	chr9:140193656..140198673-chr9:140329050..140337375,14	K562	blood:
4	chr9:140334848..140337277-chr9:140353292..140355105,2	MCF-7	breast:
5	chr9:140189903..140198274-chr9:140327279..140342312,31	MCF-7	breast:
6	chr9:140316188..140319616-chr9:140334398..140338058,5	MCF-7	breast:
7	chr9:140329147..140333153-chr9:140334253..140339110,10	MCF-7	breast:
8	chr9:140188619..140191530-chr9:140336110..140337703,2	MCF-7	breast:
9	chr9:140188855..140198797-chr9:140328049..140340935,26	K562	blood:
10	chr9:140335850..140343594-chr9:140351085..140357770,13	MCF-7	breast:

No data

Variant related genes	Relation type
ENTPD8	TF binding region
ENTPD8	CpG island
ENSG00000198435	Chromatin interaction
ENSG00000187609	Chromatin interaction
ENSG00000188833	Chromatin interaction
ENSG00000188747	Chromatin interaction
ENSG00000260996	Chromatin interaction
ENSG00000165802	Chromatin interaction

Extended variants
information (count: 100 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs11507672	1.00[AMR][1000 genomes]
rs1891626	1.00[AMR][1000 genomes]
rs55724261	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55782802	1.00[AMR][1000 genomes]
rs55841163	1.00[AMR][1000 genomes]
rs55908408	1.00[AMR][1000 genomes]
rs56183481	1.00[ASN][1000 genomes]
rs56224430	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58636691	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59029792	1.00[AMR][1000 genomes]
rs60694609	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60898848	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61004477	1.00[AMR][1000 genomes]
rs61507298	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61747296	1.00[AMR][1000 genomes]
rs61747643	1.00[AMR][1000 genomes]
rs73565598	1.00[AMR][1000 genomes]
rs73567203	1.00[AMR][1000 genomes]
rs73567205	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73567207	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73668258	1.00[AMR][1000 genomes]
rs73668259	1.00[AMR][1000 genomes]
rs73668260	1.00[AMR][1000 genomes]
rs73668261	1.00[AMR][1000 genomes]
rs73668262	1.00[AMR][1000 genomes]
rs73668264	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73668295	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73668299	1.00[AMR][1000 genomes]
rs73669105	1.00[AMR][1000 genomes]
rs73669106	1.00[AMR][1000 genomes]
rs73669109	1.00[AMR][1000 genomes]
rs73669130	1.00[AMR][1000 genomes]
rs73669131	1.00[AMR][1000 genomes]
rs9696278	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:66 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894442	chr9:139544437-140462099	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	469 gene(s)	inside rSNPs	diseases
2	nsv894452	chr9:139598108-140523429	Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	450 gene(s)	inside rSNPs	diseases
3	nsv894455	chr9:139607966-140411547	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	417 gene(s)	inside rSNPs	diseases
4	nsv894463	chr9:139683224-140411547	Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
5	nsv524322	chr9:139690144-140376668	Genic enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	371 gene(s)	inside rSNPs	diseases
6	nsv894470	chr9:139693992-140339091	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	358 gene(s)	inside rSNPs	diseases
7	nsv894474	chr9:139694521-140432318	Genic enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	374 gene(s)	inside rSNPs	diseases
8	nsv540352	chr9:139695108-140351178	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	358 gene(s)	inside rSNPs	diseases
9	nsv894484	chr9:139709976-140382705	Flanking Active TSS Genic enhancers Enhancers Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	360 gene(s)	inside rSNPs	diseases
10	nsv894485	chr9:139709976-140408904	Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	363 gene(s)	inside rSNPs	diseases
11	nsv894486	chr9:139725120-140382705	Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	359 gene(s)	inside rSNPs	diseases
12	nsv894487	chr9:139725120-140449582	Enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	363 gene(s)	inside rSNPs	diseases
13	nsv894498	chr9:139810595-140339091	Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	324 gene(s)	inside rSNPs	diseases
14	nsv894499	chr9:139810595-140734161	Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
15	nsv894501	chr9:139823670-140400275	Genic enhancers Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	338 gene(s)	inside rSNPs	diseases
16	nsv894502	chr9:139823670-140487108	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	349 gene(s)	inside rSNPs	diseases
17	esv1823555	chr9:139834714-140362439	Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	336 gene(s)	inside rSNPs	diseases
18	nsv894522	chr9:139860631-140411547	Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	331 gene(s)	inside rSNPs	diseases
19	nsv894523	chr9:139860631-140462099	Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
20	nsv894554	chr9:139879170-140339091	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	313 gene(s)	inside rSNPs	diseases
21	nsv894556	chr9:139904037-140408904	Active TSS Weak transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	310 gene(s)	inside rSNPs	diseases
22	nsv894562	chr9:139906359-140382705	Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	307 gene(s)	inside rSNPs	diseases
23	nsv894563	chr9:139906359-140408904	Active TSS ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	310 gene(s)	inside rSNPs	diseases
24	nsv894564	chr9:139906359-140432318	Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	310 gene(s)	inside rSNPs	diseases
25	nsv894583	chr9:139950351-140382705	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	297 gene(s)	inside rSNPs	diseases
26	nsv894584	chr9:139950351-140400275	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	298 gene(s)	inside rSNPs	diseases
27	nsv894588	chr9:139963091-140372570	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	295 gene(s)	inside rSNPs	diseases
28	nsv894606	chr9:140018138-140368860	Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Strong transcription Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	274 gene(s)	inside rSNPs	diseases
29	nsv894607	chr9:140018138-140382705	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	274 gene(s)	inside rSNPs	diseases
30	nsv894608	chr9:140018138-140392494	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	274 gene(s)	inside rSNPs	diseases
31	nsv894609	chr9:140018138-140400275	Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	275 gene(s)	inside rSNPs	diseases
32	nsv894610	chr9:140018138-140408904	Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	277 gene(s)	inside rSNPs	diseases
33	nsv894625	chr9:140068342-140339091	Active TSS Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	253 gene(s)	inside rSNPs	diseases
34	nsv894626	chr9:140068342-140368860	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	268 gene(s)	inside rSNPs	diseases
35	nsv894627	chr9:140068342-140382705	Genic enhancers Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	268 gene(s)	inside rSNPs	diseases
36	nsv894628	chr9:140068342-140400275	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	269 gene(s)	inside rSNPs	diseases
37	nsv894638	chr9:140094605-140368860	Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	254 gene(s)	inside rSNPs	diseases
38	nsv531664	chr9:140110329-140725056	ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	275 gene(s)	inside rSNPs	diseases
39	nsv531654	chr9:140110329-141033187	Flanking Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	281 gene(s)	inside rSNPs	diseases
40	esv1824250	chr9:140118448-140390615	Flanking Active TSS Bivalent Enhancer Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	230 gene(s)	inside rSNPs	diseases
41	nsv894645	chr9:140165584-140408904	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
42	esv1824017	chr9:140197784-140341751	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
43	esv2758205	chr9:140197784-140341751	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
44	esv2759721	chr9:140197784-140341751	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
45	nsv1047563	chr9:140219047-140560852	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
46	nsv540357	chr9:140219047-140560852	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
47	nsv894653	chr9:140228092-140343189	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
48	nsv531602	chr9:140240417-140535223	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	96 gene(s)	inside rSNPs	diseases
49	nsv932633	chr9:140240417-141053535	Enhancers Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
50	nsv894654	chr9:140243547-140382705	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:51 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140335600-140336800	Bivalent Enhancer	Primary B cells from peripheral blood	blood
2	chr9:140335800-140336800	Active TSS	H9 Cell Line	embryonic stem cell
3	chr9:140335800-140336800	Active TSS	HUES48 Cell Line	embryonic stem cell
4	chr9:140336000-140336800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr9:140336000-140339600	Weak transcription	Placenta	Placenta
6	chr9:140336200-140336800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr9:140336200-140336800	Enhancers	Primary T helper cells fromperipheralblood	blood
8	chr9:140336200-140336800	Active TSS	Aorta	Aorta
9	chr9:140336200-140339400	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr9:140336200-140339600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr9:140336200-140340000	Weak transcription	Lung	lung
12	chr9:140336200-140340000	Weak transcription	Pancreas	Pancrea
13	chr9:140336200-140342600	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr9:140336200-140343000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr9:140336200-140347800	Weak transcription	Rectal Smooth Muscle	rectum
16	chr9:140336400-140336800	Flanking Active TSS	H1 Cell Line	embryonic stem cell
17	chr9:140336400-140336800	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
18	chr9:140336400-140336800	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
19	chr9:140336400-140336800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
20	chr9:140336400-140336800	Active TSS	Primary B cells from cord blood	blood
21	chr9:140336400-140336800	Bivalent/Poised TSS	Primary hematopoietic stem cells	blood
22	chr9:140336400-140336800	Flanking Active TSS	Liver	Liver
23	chr9:140336400-140336800	Flanking Active TSS	Fetal Intestine Small	intestine
24	chr9:140336400-140336800	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
25	chr9:140336400-140336800	Flanking Active TSS	Hela-S3	cervix
26	chr9:140336400-140339600	Weak transcription	HMEC	breast
27	chr9:140336400-140339800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr9:140336400-140348200	Weak transcription	Right Atrium	heart
29	chr9:140336600-140336800	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
30	chr9:140336600-140336800	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
31	chr9:140336600-140336800	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
32	chr9:140336600-140336800	Enhancers	Breast Myoepithelial Primary Cells	Breast
33	chr9:140336600-140336800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr9:140336600-140336800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr9:140336600-140336800	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
36	chr9:140336600-140336800	Flanking Active TSS	Fetal Intestine Large	intestine
37	chr9:140336600-140336800	Enhancers	Pancreatic Islets	Pancreatic Islet
38	chr9:140336600-140336800	Flanking Active TSS	A549	lung
39	chr9:140336600-140337000	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
40	chr9:140336600-140337000	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr9:140336600-140337000	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr9:140336600-140337000	Flanking Active TSS	HepG2	liver
43	chr9:140336600-140337000	Enhancers	K562	blood
44	chr9:140336600-140339400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
45	chr9:140336600-140339400	Weak transcription	NHEK	skin
46	chr9:140336600-140339600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
47	chr9:140336600-140339600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
48	chr9:140336600-140340000	Weak transcription	Cortex derived primary cultured neurospheres	brain
49	chr9:140336600-140340000	Weak transcription	Colonic Mucosa	Colon
50	chr9:140336600-140343600	Weak transcription	Right Ventricle	heart

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