Variant report

Variant	rs73669131
Chromosome Location	chr9:140501346-140501347
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:25)
CpG islands
(count:61)
Chromatin interactive
region (count:13)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:25 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr9:140499993-140501417	Hela-S3	cervix:	n/a	n/a
2	ZNF263	chr9:140500185-140502334	HEK293-T-REx	kidney:	n/a	n/a
3	POLR2A	chr9:140501282-140501723	HepG2	liver:	n/a	n/a
4	POLR2A	chr9:140501266-140501592	GM12892	blood:	n/a	n/a
5	MAZ	chr9:140501219-140502018	IMR90	lung:	n/a	n/a
6	POLR2A	chr9:140501147-140501503	A549	lung:	n/a	n/a
7	MAX	chr9:140499549-140502413	HepG2	liver:	n/a	chr9:140500712-140500722 chr9:140499903-140499913 chr9:140499551-140499561
8	MXI1	chr9:140500071-140501469	SK-N-SH	brain:	n/a	n/a
9	HCFC1	chr9:140498594-140502431	Hela-S3	cervix:	n/a	n/a
10	POLR2A	chr9:140499388-140501628	MCF-7	breast:	n/a	n/a
11	POLR2A	chr9:140499314-140501657	MCF-7	breast:	n/a	n/a
12	MYC	chr9:140501056-140501536	MCF-7	breast:	n/a	n/a
13	POLR2A	chr9:140500067-140501773	HL-60	blood:	n/a	n/a
14	POLR2A	chr9:140499330-140501907	K562	blood:	n/a	n/a
15	PAX5	chr9:140501180-140501596	GM12878	blood:	n/a	chr9:140501400-140501418
16	POLR2A	chr9:140499992-140502398	K562	blood:	n/a	n/a
17	PAX5	chr9:140501270-140501487	GM12878	blood:	n/a	chr9:140501400-140501418
18	POLR2A	chr9:140500052-140501374	Hela-S3	cervix:	n/a	n/a
19	POLR2A	chr9:140499358-140501614	MCF-7	breast:	n/a	n/a
20	POLR2A	chr9:140500043-140501605	ECC-1	luminal epithelium:	n/a	n/a
21	MYC	chr9:140501319-140501441	MCF-7	breast:	n/a	n/a
22	POLR2A	chr9:140500875-140501997	GM12878	blood:	n/a	n/a
23	MAX	chr9:140501189-140502301	NB4	blood:	n/a	n/a
24	POLR2A	chr9:140501235-140501506	GM12878	blood:	n/a	n/a
25	MXI1	chr9:140500029-140502048	HepG2	liver:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140501305-140501355	Caco-2	colon:	n/a
2	chr9:140501305-140501355	HCT-116	colon:	n/a
3	chr9:140501305-140501355	BJ	skin:	n/a
4	chr9:140501305-140501355	HPAEpiC	pulmonary alveolar:	n/a
5	chr9:140501305-140501355	U87	brain:	n/a
6	chr9:140501305-140501355	NB4	blood:	n/a
7	chr9:140501305-140501355	Jurkat	blood:	n/a
8	chr9:140501305-140501355	K562	blood:	n/a
9	chr9:140501305-140501355	GM12891	blood:	n/a
10	chr9:140501305-140501355	AG04450	lung:	fetal
11	chr9:140501305-140501355	HUVEC	blood vessel:	n/a
12	chr9:140501305-140501355	AoSMC	blood vessel:	n/a
13	chr9:140501305-140501355	PrEC	prostate:	n/a
14	chr9:140501305-140501355	AG09319	gingival:	n/a
15	chr9:140501305-140501355	LNCaP	prostate:	n/a
16	chr9:140501305-140501355	SKMC	muscle:	n/a
17	chr9:140501305-140501355	AG04449	skin:	fetal
18	chr9:140501305-140501355	Hepatocyte	liver:	n/a
19	chr9:140501305-140501355	MCF10A-Er-Src	breast:	n/a
20	chr9:140501305-140501355	HepG2	liver:	n/a
21	chr9:140501305-140501355	HRE	kidney:	n/a
22	chr9:140501305-140501355	HRPEpiC	eye:	n/a
23	chr9:140501305-140501355	NHBE	bronchial:	n/a
24	chr9:140501305-140501355	NHDF-neo	bronchial:	n/a
25	chr9:140501305-140501355	ECC-1	luminal epithelium:	n/a
26	chr9:140501305-140501355	BE2_C	brain:	n/a
27	chr9:140501305-140501355	GM12892	blood:	n/a
28	chr9:140501305-140501355	HRCEpiC	kidney:	n/a
29	chr9:140501305-140501355	NH-A	brain:	n/a
30	chr9:140501305-140501355	ProgFib	skin:	n/a
31	chr9:140501305-140501355	HEK293	kidney:	embryo
32	chr9:140501305-140501355	PFSK-1	brain:	n/a
33	chr9:140501305-140501355	H1-hESC	embryonic stem cell:	embryo
34	chr9:140501305-140501355	HCF	heart:	n/a
35	chr9:140501305-140501355	GM06990	blood:	n/a
36	chr9:140501305-140501355	AG09309	skin:	n/a
37	chr9:140501305-140501355	HCPEpiC	choroid plexus:	n/a
38	chr9:140501305-140501355	HL-60	blood:	n/a
39	chr9:140501305-140501355	HCM	heart:	n/a
40	chr9:140501305-140501355	HNPCEpiC	eye:	n/a
41	chr9:140501305-140501355	A549	lung:	n/a
42	chr9:140501305-140501355	PANC-1	pancreas:	n/a
43	chr9:140501305-140501355	SAEC	small airway:	n/a
44	chr9:140501305-140501355	Hela-S3	cervix:	n/a
45	chr9:140501305-140501355	SK-N-MC	brain:	n/a
46	chr9:140501305-140501355	HMEC	breast:	n/a
47	chr9:140501305-140501355	HIPEpiC	eye:	n/a
48	chr9:140501305-140501355	IMR90	lung:	fetal
49	chr9:140501305-140501355	GM12878	blood:	n/a
50	chr9:140501305-140501355	CMK	blood:	n/a

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:140470445..140476327-chr9:140498022..140503450,9	K562	blood:
2	chr9:140444055..140447780-chr9:140498087..140502451,7	MCF-7	breast:
3	chr9:140443433..140448155-chr9:140497818..140502870,8	MCF-7	breast:
4	chr9:140482616..140489091-chr9:140495925..140503345,17	MCF-7	breast:
5	chr9:140500723..140503070-chr9:140566116..140568927,3	K562	blood:
6	chr9:140482416..140489757-chr9:140495738..140502746,21	K562	blood:
7	chr9:140480405..140490432-chr9:140494944..140502746,26	K562	blood:
8	chr9:140443479..140444983-chr9:140499290..140501657,2	K562	blood:
9	chr9:140470766..140479486-chr9:140497266..140502997,13	MCF-7	breast:
10	chr9:140470600..140473358-chr9:140498484..140501413,2	K562	blood:
11	chr9:140444986..140448753-chr9:140497892..140501428,4	K562	blood:
12	chr17:56707742..56709303-chr9:140500647..140503505,2	MCF-7	breast:
13	chr9:140353049..140355083-chr9:140500607..140502657,2	K562	blood:

No data

Variant related genes	Relation type
ARRDC1	TF binding region
ARRDC1	CpG island
ENSG00000165802	Chromatin interaction
ENSG00000182154	Chromatin interaction
ENSG00000130653	Chromatin interaction
ENSG00000148399	Chromatin interaction
ENSG00000212195	Chromatin interaction
ENSG00000165724	Chromatin interaction

Extended variants
information (count: 69 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11137198	1.00[AMR][1000 genomes]
rs11507672	1.00[AMR][1000 genomes]
rs1891626	1.00[AMR][1000 genomes]
rs55724261	1.00[AMR][1000 genomes]
rs55782802	1.00[AMR][1000 genomes]
rs55908408	1.00[AMR][1000 genomes]
rs56224430	1.00[AMR][1000 genomes]
rs58636691	1.00[AMR][1000 genomes]
rs59029792	1.00[AMR][1000 genomes]
rs60694609	1.00[AMR][1000 genomes]
rs60898848	1.00[AMR][1000 genomes]
rs61507298	1.00[AMR][1000 genomes]
rs61747296	1.00[AMR][1000 genomes]
rs61747643	1.00[AMR][1000 genomes]
rs73565598	1.00[AMR][1000 genomes]
rs73567203	1.00[AMR][1000 genomes]
rs73567205	1.00[AMR][1000 genomes]
rs73567207	1.00[AMR][1000 genomes]
rs73668261	1.00[AMR][1000 genomes]
rs73668262	1.00[AMR][1000 genomes]
rs73668264	1.00[AMR][1000 genomes]
rs73668295	1.00[AMR][1000 genomes]
rs73668298	1.00[AMR][1000 genomes]
rs73668299	1.00[AMR][1000 genomes]
rs73669105	1.00[AMR][1000 genomes]
rs73669106	1.00[AMR][1000 genomes]
rs73669109	1.00[AMR][1000 genomes]
rs73669130	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73669132	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73669134	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:39 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894452	chr9:139598108-140523429	Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	450 gene(s)	inside rSNPs	diseases
2	nsv894499	chr9:139810595-140734161	Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
3	nsv531664	chr9:140110329-140725056	ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	275 gene(s)	inside rSNPs	diseases
4	nsv531654	chr9:140110329-141033187	Flanking Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	281 gene(s)	inside rSNPs	diseases
5	nsv1047563	chr9:140219047-140560852	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
6	nsv540357	chr9:140219047-140560852	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
7	nsv531602	chr9:140240417-140535223	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	96 gene(s)	inside rSNPs	diseases
8	nsv932633	chr9:140240417-141053535	Enhancers Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
9	nsv1035524	chr9:140251014-140751633	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
10	nsv1053628	chr9:140260666-141005637	Active TSS Weak transcription Strong transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
11	nsv534215	chr9:140286134-141008915	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	n/a
12	nsv1035388	chr9:140306746-140654768	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	96 gene(s)	inside rSNPs	n/a
13	nsv831762	chr9:140338779-140514107	Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	82 gene(s)	inside rSNPs	n/a
14	nsv1039672	chr9:140343466-140707505	Active TSS Strong transcription Weak transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	85 gene(s)	inside rSNPs	n/a
15	nsv540358	chr9:140343466-140707505	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	85 gene(s)	inside rSNPs	n/a
16	nsv1041512	chr9:140350404-140612859	Strong transcription Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	83 gene(s)	inside rSNPs	n/a
17	nsv540359	chr9:140350404-140612859	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	83 gene(s)	inside rSNPs	n/a
18	nsv616022	chr9:140372570-140523429	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	n/a
19	nsv616023	chr9:140372570-140602887	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	n/a
20	nsv531603	chr9:140378700-140590977	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	n/a
21	nsv531665	chr9:140378700-141073897	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	n/a
22	nsv868924	chr9:140407572-141053525	Weak transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	n/a
23	nsv1039933	chr9:140408112-141005637	Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	68 gene(s)	inside rSNPs	n/a
24	nsv531666	chr9:140409395-141015925	Weak transcription Active TSS Strong transcription Genic enhancers Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	68 gene(s)	inside rSNPs	n/a
25	nsv616024	chr9:140414410-140536098	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	n/a
26	nsv831763	chr9:140439831-140614021	Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	n/a
27	nsv540364	chr9:140447860-140514807	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	n/a
28	esv3398333	chr9:140451462-140814795	Strong transcription Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	60 gene(s)	inside rSNPs	n/a
29	nsv1052036	chr9:140452641-141018985	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	n/a
30	nsv540365	chr9:140452641-141018985	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	n/a
31	nsv949702	chr9:140466816-141027939	Strong transcription Active TSS Genic enhancers Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	62 gene(s)	inside rSNPs	n/a
32	nsv531667	chr9:140468821-140936261	Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	n/a
33	nsv894665	chr9:140469600-140523429	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	51 gene(s)	inside rSNPs	n/a
34	nsv894666	chr9:140470564-140518576	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	51 gene(s)	inside rSNPs	n/a
35	nsv894667	chr9:140473729-140518576	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	n/a
36	nsv894668	chr9:140477812-140518576	Flanking Active TSS Weak transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	n/a
37	nsv531668	chr9:140492807-140986221	Strong transcription Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	n/a
38	esv3372704	chr9:140498156-140501504	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	n/a
39	nsv894669	chr9:140498789-140518576	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	39 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140499000-140501400	Active TSS	H9 Cell Line	embryonic stem cell
2	chr9:140499000-140501800	Active TSS	Pancreatic Islets	Pancreatic Islet
3	chr9:140499200-140501400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr9:140499200-140501400	Active TSS	NHEK	skin
5	chr9:140499200-140501800	Active TSS	Small Intestine	intestine
6	chr9:140500200-140501600	Transcr. at gene 5' and 3'	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr9:140500200-140502000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
8	chr9:140500200-140502000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr9:140500200-140502000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
10	chr9:140500200-140502000	Flanking Active TSS	Stomach Smooth Muscle	stomach
11	chr9:140500400-140501600	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr9:140500400-140501800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
13	chr9:140500400-140502400	Flanking Active TSS	Primary B cells from cord blood	blood
14	chr9:140500600-140501800	Flanking Active TSS	Adipose Nuclei	Adipose
15	chr9:140500600-140501800	Flanking Active TSS	NHLF	lung
16	chr9:140500600-140502000	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr9:140500600-140502000	Flanking Active TSS	Primary hematopoietic stem cells	blood
18	chr9:140500600-140502000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr9:140500600-140502000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr9:140500600-140502000	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
21	chr9:140500600-140502000	Flanking Active TSS	Brain Hippocampus Middle	brain
22	chr9:140500600-140502200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
23	chr9:140500600-140502200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
24	chr9:140500600-140502200	Flanking Active TSS	Colonic Mucosa	Colon
25	chr9:140500600-140502400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr9:140500600-140502400	Enhancers	Fetal Brain Male	brain
27	chr9:140500800-140501400	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr9:140500800-140501400	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
29	chr9:140500800-140501400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr9:140500800-140501400	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr9:140500800-140501400	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
32	chr9:140500800-140501400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
33	chr9:140500800-140501400	Flanking Active TSS	Thymus	Thymus
34	chr9:140500800-140501600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr9:140500800-140501600	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
36	chr9:140500800-140501600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
37	chr9:140500800-140501600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
38	chr9:140500800-140501600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr9:140500800-140501600	Bivalent Enhancer	Fetal Lung	lung
40	chr9:140500800-140501600	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
41	chr9:140500800-140501600	Flanking Active TSS	Lung	lung
42	chr9:140500800-140501600	Flanking Active TSS	Psoas Muscle	Psoas
43	chr9:140500800-140501600	Flanking Active TSS	Rectal Smooth Muscle	rectum
44	chr9:140500800-140501600	Flanking Active TSS	Right Atrium	heart
45	chr9:140500800-140501600	Flanking Active TSS	Spleen	Spleen
46	chr9:140500800-140501600	Flanking Active TSS	Dnd41	blood
47	chr9:140500800-140501800	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr9:140500800-140501800	Flanking Active TSS	Primary T cells from cord blood	blood
49	chr9:140500800-140501800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
50	chr9:140500800-140501800	Flanking Active TSS	Liver	Liver

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