The 2.0 version of rSNPBase

Variant report

Variant rs55724261
Chromosome Location chr9:140309464-140309465
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140302000-140310600 Weak transcription Fetal Brain Female brain
2 chr9:140302200-140311000 Weak transcription Brain Germinal Matrix brain
3 chr9:140302200-140311000 Weak transcription Fetal Intestine Large intestine
4 chr9:140302200-140311800 Weak transcription Colon Smooth Muscle Colon
5 chr9:140302200-140316800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr9:140302600-140316600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr9:140304400-140316000 Weak transcription Fetal Brain Male brain
8 chr9:140305000-140309600 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr9:140305000-140309600 Enhancers Fetal Muscle Leg muscle
10 chr9:140306000-140310000 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr9:140306000-140316000 Weak transcription Brain Hippocampus Middle brain
12 chr9:140306600-140312000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr9:140306600-140312000 Weak transcription Psoas Muscle Psoas
14 chr9:140306600-140313400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr9:140306600-140315800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr9:140306600-140316000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr9:140306600-140316200 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr9:140306800-140309600 Enhancers Primary hematopoietic stem cells blood
19 chr9:140306800-140309600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr9:140306800-140311600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr9:140306800-140311600 Weak transcription Stomach Smooth Muscle stomach
22 chr9:140306800-140316200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr9:140306800-140316600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr9:140306800-140316600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr9:140307000-140313200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr9:140307000-140316200 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr9:140307200-140310000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr9:140307200-140310600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr9:140307200-140311200 Weak transcription Primary T cells fromperipheralblood blood
30 chr9:140307200-140311200 Weak transcription Adipose Nuclei Adipose
31 chr9:140307200-140311200 Weak transcription Lung lung
32 chr9:140307200-140311800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr9:140307200-140311800 Weak transcription Esophagus oesophagus
34 chr9:140307200-140315800 Weak transcription Fetal Lung lung
35 chr9:140307200-140316000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr9:140307200-140316000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr9:140307400-140311600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr9:140307400-140311800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr9:140307400-140316000 Weak transcription HepG2 liver
40 chr9:140307400-140316400 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr9:140307600-140310600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr9:140307600-140310800 Weak transcription Spleen Spleen
43 chr9:140307600-140311200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr9:140307600-140311400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr9:140307600-140311400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr9:140307600-140311400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr9:140307600-140311600 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr9:140307600-140311600 Weak transcription Muscle Satellite Cultured Cells --
49 chr9:140307600-140311600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr9:140307600-140311600 Weak transcription NHEK skin

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Last update: Aug 31, 2015