Variant report

Variant rs55841163
Chromosome Location chr9:140277341-140277342
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140239200-140288800 Weak transcription Placenta Amnion Placenta Amnion
2 chr9:140253000-140281000 Weak transcription Colonic Mucosa Colon
3 chr9:140257400-140290200 Weak transcription Colon Smooth Muscle Colon
4 chr9:140258600-140299400 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr9:140260600-140285000 Weak transcription Brain Angular Gyrus brain
6 chr9:140262200-140285000 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr9:140262400-140281600 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr9:140263000-140281600 Weak transcription Left Ventricle heart
9 chr9:140264000-140281000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr9:140264400-140280600 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr9:140265200-140285000 Weak transcription Brain Substantia Nigra brain
12 chr9:140265800-140281800 Weak transcription Fetal Lung lung
13 chr9:140266000-140283400 Weak transcription Brain Inferior Temporal Lobe brain
14 chr9:140266000-140285000 Weak transcription Brain Hippocampus Middle brain
15 chr9:140266400-140290800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr9:140267200-140281600 Weak transcription Fetal Muscle Leg muscle
17 chr9:140267400-140281600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr9:140267600-140285000 Weak transcription Brain Cingulate Gyrus brain
19 chr9:140268000-140281600 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr9:140268000-140286600 Weak transcription Fetal Brain Female brain
21 chr9:140268000-140289000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr9:140268200-140285000 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr9:140268400-140281600 Weak transcription Pancreas Pancrea
24 chr9:140269000-140281800 Weak transcription Adipose Nuclei Adipose
25 chr9:140269000-140283400 Weak transcription Gastric stomach
26 chr9:140269200-140281000 Weak transcription Right Ventricle heart
27 chr9:140269200-140282000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr9:140270400-140281600 Weak transcription Stomach Smooth Muscle stomach
29 chr9:140270400-140286600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr9:140270600-140285800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr9:140271800-140285400 Weak transcription Esophagus oesophagus
32 chr9:140273400-140279200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr9:140274400-140278400 Weak transcription Ovary ovary
34 chr9:140274600-140277600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr9:140274600-140281000 Weak transcription Fetal Intestine Large intestine
36 chr9:140274600-140286400 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr9:140274800-140285400 Weak transcription Brain Germinal Matrix brain
38 chr9:140275000-140281000 Weak transcription Right Atrium heart
39 chr9:140275800-140277400 Strong transcription Fetal Stomach stomach
40 chr9:140276000-140277600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr9:140276200-140277400 Enhancers Spleen Spleen
42 chr9:140276400-140277400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr9:140276400-140278000 Genic enhancers Lung lung
44 chr9:140276800-140278200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
45 chr9:140276800-140281600 Strong transcription Fetal Intestine Small intestine
46 chr9:140277000-140277600 Strong transcription Aorta Aorta
47 chr9:140277000-140277800 Enhancers H1 Cell Line embryonic stem cell
48 chr9:140277000-140277800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr9:140277000-140277800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr9:140277000-140277800 Flanking Active TSS HepG2 liver

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