No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
nsv894442 |
chr9:139544437-140462099 |
Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
469 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv894452 |
chr9:139598108-140523429 |
Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
450 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv894455 |
chr9:139607966-140411547 |
Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
417 gene(s)
|
inside rSNPs
|
diseases
|
4 |
nsv894463 |
chr9:139683224-140411547 |
Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
376 gene(s)
|
inside rSNPs
|
diseases
|
5 |
nsv894474 |
chr9:139694521-140432318 |
Genic enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
374 gene(s)
|
inside rSNPs
|
diseases
|
6 |
nsv894485 |
chr9:139709976-140408904 |
Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
363 gene(s)
|
inside rSNPs
|
diseases
|
7 |
nsv894487 |
chr9:139725120-140449582 |
Enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
363 gene(s)
|
inside rSNPs
|
diseases
|
8 |
nsv894499 |
chr9:139810595-140734161 |
Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
376 gene(s)
|
inside rSNPs
|
diseases
|
9 |
nsv894501 |
chr9:139823670-140400275 |
Genic enhancers Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
338 gene(s)
|
inside rSNPs
|
diseases
|
10 |
nsv894502 |
chr9:139823670-140487108 |
Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
349 gene(s)
|
inside rSNPs
|
diseases
|
11 |
nsv894522 |
chr9:139860631-140411547 |
Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
331 gene(s)
|
inside rSNPs
|
diseases
|
12 |
nsv894523 |
chr9:139860631-140462099 |
Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
332 gene(s)
|
inside rSNPs
|
diseases
|
13 |
nsv894556 |
chr9:139904037-140408904 |
Active TSS Weak transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
310 gene(s)
|
inside rSNPs
|
diseases
|
14 |
nsv894563 |
chr9:139906359-140408904 |
Active TSS ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Weak transcription Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
310 gene(s)
|
inside rSNPs
|
diseases
|
15 |
nsv894564 |
chr9:139906359-140432318 |
Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
310 gene(s)
|
inside rSNPs
|
diseases
|
16 |
nsv894584 |
chr9:139950351-140400275 |
Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
298 gene(s)
|
inside rSNPs
|
diseases
|
17 |
nsv894609 |
chr9:140018138-140400275 |
Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
275 gene(s)
|
inside rSNPs
|
diseases
|
18 |
nsv894610 |
chr9:140018138-140408904 |
Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
277 gene(s)
|
inside rSNPs
|
diseases
|
19 |
nsv894628 |
chr9:140068342-140400275 |
Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
269 gene(s)
|
inside rSNPs
|
diseases
|
20 |
nsv531664 |
chr9:140110329-140725056 |
ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
275 gene(s)
|
inside rSNPs
|
diseases
|
21 |
nsv531654 |
chr9:140110329-141033187 |
Flanking Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
281 gene(s)
|
inside rSNPs
|
diseases
|
22 |
nsv894645 |
chr9:140165584-140408904 |
Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
84 gene(s)
|
inside rSNPs
|
diseases
|
23 |
nsv1047563 |
chr9:140219047-140560852 |
Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
97 gene(s)
|
inside rSNPs
|
diseases
|
24 |
nsv540357 |
chr9:140219047-140560852 |
Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
97 gene(s)
|
inside rSNPs
|
diseases
|
25 |
nsv531602 |
chr9:140240417-140535223 |
Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
96 gene(s)
|
inside rSNPs
|
diseases
|
26 |
nsv932633 |
chr9:140240417-141053535 |
Enhancers Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
107 gene(s)
|
inside rSNPs
|
diseases
|
27 |
nsv1035524 |
chr9:140251014-140751633 |
Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
99 gene(s)
|
inside rSNPs
|
diseases
|
28 |
nsv1053628 |
chr9:140260666-141005637 |
Active TSS Weak transcription Strong transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
105 gene(s)
|
inside rSNPs
|
diseases
|
29 |
nsv534215 |
chr9:140286134-141008915 |
Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
105 gene(s)
|
inside rSNPs
|
n/a
|
30 |
nsv894660 |
chr9:140301447-140411547 |
Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
55 gene(s)
|
inside rSNPs
|
n/a
|
31 |
nsv1035388 |
chr9:140306746-140654768 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
96 gene(s)
|
inside rSNPs
|
n/a
|
32 |
nsv831762 |
chr9:140338779-140514107 |
Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
82 gene(s)
|
inside rSNPs
|
n/a
|
33 |
nsv1039672 |
chr9:140343466-140707505 |
Active TSS Strong transcription Weak transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
85 gene(s)
|
inside rSNPs
|
n/a
|
34 |
nsv540358 |
chr9:140343466-140707505 |
Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
85 gene(s)
|
inside rSNPs
|
n/a
|
35 |
nsv1041512 |
chr9:140350404-140612859 |
Strong transcription Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
83 gene(s)
|
inside rSNPs
|
n/a
|
36 |
nsv540359 |
chr9:140350404-140612859 |
Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
83 gene(s)
|
inside rSNPs
|
n/a
|
37 |
nsv616022 |
chr9:140372570-140523429 |
Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
65 gene(s)
|
inside rSNPs
|
n/a
|
38 |
nsv616023 |
chr9:140372570-140602887 |
Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
66 gene(s)
|
inside rSNPs
|
n/a
|
39 |
nsv540361 |
chr9:140376959-140415925 |
Bivalent Enhancer Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
16 gene(s)
|
inside rSNPs
|
n/a
|
40 |
nsv531603 |
chr9:140378700-140590977 |
Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
66 gene(s)
|
inside rSNPs
|
n/a
|
41 |
nsv531665 |
chr9:140378700-141073897 |
Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
77 gene(s)
|
inside rSNPs
|
n/a
|
42 |
nsv894663 |
chr9:140382705-140454791 |
Weak transcription Strong transcription Bivalent Enhancer Active TSS Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
25 gene(s)
|
inside rSNPs
|
n/a
|
43 |
esv3391775 |
chr9:140391531-140395729 |
Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Enhancers Active TSS Genic enhancers Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
inside rSNPs
|
n/a
|