The 2.0 version of rSNPBase

Variant report

Variant rs28578690
Chromosome Location chr18:9159347-9159348
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:9138200-9162200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr18:9140000-9162000 Weak transcription Thymus Thymus
3 chr18:9140000-9163000 Weak transcription Fetal Intestine Large intestine
4 chr18:9140800-9160200 Enhancers Primary T helper cells fromperipheralblood blood
5 chr18:9141600-9161000 Enhancers Primary T helper naive cells fromperipheralblood blood
6 chr18:9142400-9174000 Weak transcription HSMMtube muscle
7 chr18:9146600-9174000 Weak transcription Esophagus oesophagus
8 chr18:9147800-9163000 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr18:9147800-9165200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr18:9148000-9159400 Weak transcription Fetal Stomach stomach
11 chr18:9148000-9159800 Weak transcription Fetal Intestine Small intestine
12 chr18:9148000-9160800 Weak transcription Brain Cingulate Gyrus brain
13 chr18:9148000-9161800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr18:9148000-9171400 Weak transcription NHDF-Ad bronchial
15 chr18:9148000-9173800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr18:9148200-9159400 Enhancers Primary T helper cells PMA-I stimulated --
17 chr18:9148200-9161800 Weak transcription Fetal Kidney kidney
18 chr18:9148200-9162800 Weak transcription Dnd41 blood
19 chr18:9148200-9162800 Weak transcription Hela-S3 cervix
20 chr18:9148200-9164000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr18:9148200-9173800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr18:9148400-9187200 Weak transcription Muscle Satellite Cultured Cells --
23 chr18:9149200-9160600 Weak transcription Brain Angular Gyrus brain
24 chr18:9150400-9161600 Weak transcription HSMM muscle
25 chr18:9150400-9173200 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr18:9151400-9173800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr18:9151600-9160600 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr18:9151800-9174000 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr18:9152200-9162000 Weak transcription Fetal Muscle Leg muscle
30 chr18:9152400-9160400 Weak transcription Primary B cells from peripheral blood blood
31 chr18:9152800-9160400 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr18:9153200-9161400 Weak transcription Stomach Smooth Muscle stomach
33 chr18:9153400-9160400 Weak transcription Brain Hippocampus Middle brain
34 chr18:9153600-9160400 Weak transcription Colon Smooth Muscle Colon
35 chr18:9153600-9160400 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr18:9153600-9182400 Weak transcription Liver Liver
37 chr18:9153600-9185000 Weak transcription Rectal Smooth Muscle rectum
38 chr18:9154200-9174000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr18:9154400-9162600 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr18:9154600-9159800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr18:9154600-9160000 Weak transcription Gastric stomach
42 chr18:9154600-9160000 Weak transcription Left Ventricle heart
43 chr18:9154600-9160000 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr18:9154600-9160200 Weak transcription Ovary ovary
45 chr18:9154600-9161000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr18:9154600-9162000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr18:9154600-9162000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr18:9154600-9162000 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr18:9154600-9162000 Weak transcription Right Atrium heart
50 chr18:9154600-9164000 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015