Variant report

Variant rs28600230
Chromosome Location chr6:31275742-31275743
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31274000-31276200 Weak transcription Right Atrium heart
2 chr6:31275200-31276800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
3 chr6:31275400-31275800 Active TSS ES-WA7 Cell Line embryonic stem cell
4 chr6:31275400-31275800 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
5 chr6:31275400-31275800 Enhancers Primary T helper 17 cells PMA-I stimulated --
6 chr6:31275400-31275800 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
7 chr6:31275400-31276200 Active TSS iPS-20b Cell Line embryonic stem cell
8 chr6:31275400-31276400 Active TSS H1 Cell Line embryonic stem cell
9 chr6:31275400-31276600 Bivalent/Poised TSS Right Ventricle heart
10 chr6:31275400-31277000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
11 chr6:31275400-31277000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
12 chr6:31275600-31275800 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
13 chr6:31275600-31275800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr6:31275600-31275800 Bivalent Enhancer Primary T regulatory cells fromperipheralblood blood
15 chr6:31275600-31275800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
16 chr6:31275600-31275800 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
17 chr6:31275600-31275800 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr6:31275600-31275800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
19 chr6:31275600-31275800 Flanking Bivalent TSS/Enh Duodenum Mucosa Duodenum
20 chr6:31275600-31275800 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
21 chr6:31275600-31275800 Bivalent/Poised TSS Rectal Mucosa Donor 31 rectum
22 chr6:31275600-31276000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr6:31275600-31276000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
24 chr6:31275600-31276000 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr6:31275600-31276000 Enhancers Pancreas Pancrea
26 chr6:31275600-31276000 Bivalent Enhancer Rectal Mucosa Donor 29 rectum
27 chr6:31275600-31276000 Bivalent Enhancer Stomach Mucosa stomach
28 chr6:31275600-31276000 Bivalent Enhancer HMEC breast
29 chr6:31275600-31276200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
30 chr6:31275600-31276200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
31 chr6:31275600-31276200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
32 chr6:31275600-31276400 Active TSS Primary T killer memory cells from peripheral blood blood
33 chr6:31275600-31276400 Bivalent/Poised TSS A549 lung
34 chr6:31275600-31276600 Active TSS iPS-18 Cell Line embryonic stem cell
35 chr6:31275600-31276600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
36 chr6:31275600-31276600 Active TSS Primary T helper naive cells from peripheral blood blood
37 chr6:31275600-31276600 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
38 chr6:31275600-31276800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
39 chr6:31275600-31276800 Flanking Active TSS Primary B cells from peripheral blood blood
40 chr6:31275600-31276800 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
41 chr6:31275600-31276800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
42 chr6:31275600-31277000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
43 chr6:31275600-31277200 Enhancers Spleen Spleen

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