Variant report

Variant	rs28610248
Chromosome Location	chr8:126422312-126422313
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10087340	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11990006	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28674919	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73342874	1.00[EUR][1000 genomes]
rs73342875	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126404400-126424400	Weak transcription	Spleen	Spleen
2	chr8:126414000-126422800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr8:126417600-126423000	Weak transcription	Lung	lung
4	chr8:126417800-126422400	Weak transcription	NH-A	brain
5	chr8:126417800-126422800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr8:126417800-126422800	Weak transcription	Ovary	ovary
7	chr8:126417800-126423200	Weak transcription	Fetal Muscle Trunk	muscle
8	chr8:126417800-126426200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr8:126417800-126430200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr8:126418000-126424800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr8:126418200-126422400	Weak transcription	HUVEC	blood vessel
12	chr8:126421000-126423200	Enhancers	HepG2	liver
13	chr8:126421600-126422600	Enhancers	Hela-S3	cervix
14	chr8:126421600-126424800	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr8:126421800-126422400	Enhancers	A549	lung
16	chr8:126421800-126422600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr8:126421800-126425200	Enhancers	Pancreas	Pancrea
18	chr8:126421800-126433600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr8:126422000-126425800	Weak transcription	H9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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