Variant report

Variant rs28615543
Chromosome Location chr15:41556015-41556016
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:41524200-41563800 Weak transcription Small Intestine intestine
2 chr15:41524200-41575800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr15:41524800-41563800 Weak transcription Esophagus oesophagus
4 chr15:41525200-41556400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr15:41525200-41575400 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr15:41525400-41556200 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr15:41525400-41556800 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr15:41525800-41575200 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr15:41534200-41556400 Weak transcription Spleen Spleen
10 chr15:41536600-41573600 Weak transcription Placenta Amnion Placenta Amnion
11 chr15:41537400-41570800 Weak transcription Ovary ovary
12 chr15:41537600-41562800 Weak transcription Lung lung
13 chr15:41542800-41572000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr15:41543000-41575200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr15:41545000-41571400 Weak transcription H9 Cell Line embryonic stem cell
16 chr15:41549200-41575200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr15:41549800-41556200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr15:41550400-41571400 Weak transcription Right Ventricle heart
19 chr15:41550400-41575600 Weak transcription Fetal Brain Male brain
20 chr15:41550600-41564200 Weak transcription NHDF-Ad bronchial
21 chr15:41551800-41568600 Weak transcription Fetal Lung lung
22 chr15:41551800-41570600 Weak transcription HMEC breast
23 chr15:41552400-41574600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr15:41552600-41575200 Weak transcription GM12878-XiMat blood
25 chr15:41552800-41575800 Weak transcription Primary hematopoietic stem cells blood
26 chr15:41553000-41560000 Strong transcription Fetal Intestine Small intestine
27 chr15:41553600-41569200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr15:41554200-41557200 Strong transcription Fetal Brain Female brain
29 chr15:41554400-41557200 Strong transcription Cortex derived primary cultured neurospheres brain
30 chr15:41554400-41557600 Strong transcription Primary T cells fromperipheralblood blood
31 chr15:41554400-41559600 Strong transcription Fetal Muscle Trunk muscle
32 chr15:41554600-41556200 Enhancers iPS-15b Cell Line embryonic stem cell
33 chr15:41554600-41557000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr15:41554600-41557000 Strong transcription Brain Hippocampus Middle brain
35 chr15:41554600-41557200 Strong transcription Primary T cells from cord blood blood
36 chr15:41554600-41557200 Strong transcription Primary hematopoietic stem cells short term culture blood
37 chr15:41554600-41557200 Strong transcription Brain Anterior Caudate brain
38 chr15:41554600-41557200 Strong transcription Duodenum Mucosa Duodenum
39 chr15:41554600-41557400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr15:41554600-41557400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr15:41554600-41557400 Strong transcription Duodenum Smooth Muscle Duodenum
42 chr15:41554600-41557600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr15:41554600-41557600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr15:41554600-41557600 Strong transcription Colonic Mucosa Colon
45 chr15:41554600-41557600 Strong transcription Rectal Mucosa Donor 31 rectum
46 chr15:41554600-41558600 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr15:41554600-41559000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr15:41554600-41559000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr15:41554600-41559600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr15:41554600-41560600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin

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