Variant report

Variant	rs28629963
Chromosome Location	chr4:30795962-30795963
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10012692	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10023716	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28420961	1.00[AMR][1000 genomes]
rs28489673	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28647449	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28720058	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9654124	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9993447	1.00[AMR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30791200-30804400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr4:30791400-30802400	Weak transcription	Aorta	Aorta
3	chr4:30791400-30802600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr4:30791600-30809800	Weak transcription	Fetal Lung	lung
5	chr4:30794000-30796000	Enhancers	Fetal Heart	heart
6	chr4:30794000-30796200	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr4:30794000-30796600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr4:30794200-30796000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr4:30794200-30796000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr4:30794200-30796200	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr4:30794400-30796000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr4:30794400-30796200	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr4:30794600-30796200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr4:30794600-30803800	Weak transcription	HSMMtube	muscle
15	chr4:30794600-30805000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr4:30794800-30796000	Enhancers	iPS-20b Cell Line	embryonic stem cell
17	chr4:30794800-30796200	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr4:30795200-30796200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr4:30795400-30796000	Enhancers	Pancreatic Islets	Pancreatic Islet
20	chr4:30795400-30796200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr4:30795600-30796000	Enhancers	Brain Germinal Matrix	brain
22	chr4:30795800-30797000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr4:30795800-30824000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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