Variant report

Variant rs28630807
Chromosome Location chr17:18251809-18251810
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:18219400-18266000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr17:18222400-18266200 Weak transcription Small Intestine intestine
3 chr17:18223600-18265400 Strong transcription Fetal Stomach stomach
4 chr17:18223800-18253600 Strong transcription Thymus Thymus
5 chr17:18224200-18253000 Weak transcription Fetal Heart heart
6 chr17:18228200-18265800 Weak transcription Fetal Brain Male brain
7 chr17:18228600-18266000 Weak transcription HSMM muscle
8 chr17:18229000-18266000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr17:18230000-18260000 Weak transcription Muscle Satellite Cultured Cells --
10 chr17:18230200-18260200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr17:18230200-18265600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr17:18231000-18266000 Weak transcription Psoas Muscle Psoas
13 chr17:18231200-18260600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr17:18235400-18256600 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr17:18235800-18265400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr17:18237600-18260200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr17:18242200-18260400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr17:18242400-18252200 Strong transcription H9 Cell Line embryonic stem cell
19 chr17:18242400-18252400 Strong transcription HepG2 liver
20 chr17:18242400-18253000 Strong transcription Cortex derived primary cultured neurospheres brain
21 chr17:18242400-18253000 Strong transcription Adipose Nuclei Adipose
22 chr17:18242400-18253000 Strong transcription Duodenum Mucosa Duodenum
23 chr17:18242400-18258200 Strong transcription iPS-18 Cell Line embryonic stem cell
24 chr17:18242400-18259600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr17:18242400-18264000 Strong transcription Fetal Thymus thymus
26 chr17:18242600-18252200 Strong transcription Esophagus oesophagus
27 chr17:18242600-18258200 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr17:18242600-18260400 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr17:18242800-18257000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr17:18243600-18260400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr17:18243800-18264200 Strong transcription HUES64 Cell Line embryonic stem cell
32 chr17:18244000-18256200 Weak transcription Colon Smooth Muscle Colon
33 chr17:18244000-18263800 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr17:18244200-18259800 Strong transcription H1 Cell Line embryonic stem cell
35 chr17:18244200-18263800 Strong transcription Fetal Intestine Small intestine
36 chr17:18244400-18252800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr17:18244400-18255200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr17:18244400-18264200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr17:18244400-18264200 Strong transcription HUES6 Cell Line embryonic stem cell
40 chr17:18244400-18266200 Weak transcription Stomach Mucosa stomach
41 chr17:18244600-18252400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr17:18244600-18258000 Strong transcription iPS-20b Cell Line embryonic stem cell
43 chr17:18245400-18266000 Weak transcription NH-A brain
44 chr17:18246800-18253000 Strong transcription Primary T cells from cord blood blood
45 chr17:18247000-18252200 Strong transcription iPS-15b Cell Line embryonic stem cell
46 chr17:18247000-18252200 Strong transcription Lung lung
47 chr17:18247000-18254200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr17:18247000-18258000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr17:18247000-18258200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr17:18247200-18252000 Strong transcription Brain Anterior Caudate brain

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