The 2.0 version of rSNPBase

Variant report

Variant rs28644315
Chromosome Location chr4:54359261-54359262
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54327800-54362200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr4:54328200-54362000 Weak transcription Brain Inferior Temporal Lobe brain
3 chr4:54328400-54362000 Weak transcription Brain Angular Gyrus brain
4 chr4:54329600-54373600 Weak transcription Brain Germinal Matrix brain
5 chr4:54329800-54374000 Weak transcription Left Ventricle heart
6 chr4:54333000-54363600 Weak transcription Aorta Aorta
7 chr4:54333000-54374800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr4:54342800-54360600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr4:54343000-54385600 Weak transcription Fetal Brain Female brain
10 chr4:54343200-54376800 Weak transcription Brain Anterior Caudate brain
11 chr4:54343400-54363000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr4:54343600-54364600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr4:54346400-54374000 Weak transcription Right Ventricle heart
14 chr4:54347600-54401800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr4:54348000-54362200 Weak transcription Fetal Intestine Large intestine
16 chr4:54348200-54359600 Weak transcription Duodenum Mucosa Duodenum
17 chr4:54349000-54360000 Weak transcription Liver Liver
18 chr4:54352800-54361800 Weak transcription Fetal Intestine Small intestine
19 chr4:54352800-54362000 Weak transcription Esophagus oesophagus
20 chr4:54353600-54362000 Weak transcription Gastric stomach
21 chr4:54353600-54362000 Weak transcription Pancreas Pancrea
22 chr4:54355200-54378600 Weak transcription Fetal Brain Male brain
23 chr4:54356600-54373400 Weak transcription Right Atrium heart
24 chr4:54356800-54362400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr4:54357200-54362600 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr4:54357400-54363000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr4:54357600-54362200 Weak transcription Fetal Muscle Trunk muscle
28 chr4:54357600-54362800 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr4:54357800-54361800 Weak transcription Stomach Mucosa stomach
30 chr4:54357800-54362000 Weak transcription Ovary ovary
31 chr4:54357800-54362400 Weak transcription HSMMtube muscle
32 chr4:54357800-54362800 Weak transcription Fetal Lung lung
33 chr4:54357800-54363000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr4:54357800-54363000 Weak transcription Adipose Nuclei Adipose
35 chr4:54357800-54363200 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr4:54357800-54363400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr4:54357800-54363400 Weak transcription Fetal Stomach stomach
38 chr4:54357800-54363600 Weak transcription NHDF-Ad bronchial
39 chr4:54357800-54363600 Weak transcription Osteobl bone
40 chr4:54358600-54362800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr4:54358600-54365400 Weak transcription Lung lung
42 chr4:54358800-54360000 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015