The 2.0 version of rSNPBase

Variant report

Variant rs28656154
Chromosome Location chr4:57969755-57969756
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57956800-57974400 Weak transcription Monocytes-CD14+_RO01746 blood
2 chr4:57957000-57974600 Weak transcription Primary hematopoietic stem cells blood
3 chr4:57957200-57975200 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr4:57958200-57975200 Weak transcription Primary monocytes fromperipheralblood blood
5 chr4:57958200-57975400 Weak transcription Small Intestine intestine
6 chr4:57959800-57973400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
7 chr4:57963800-57969800 Enhancers Fetal Heart heart
8 chr4:57963800-57970600 Enhancers NHDF-Ad bronchial
9 chr4:57964000-57973200 Weak transcription Duodenum Mucosa Duodenum
10 chr4:57964200-57972200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr4:57964600-57973200 Weak transcription Pancreas Pancrea
12 chr4:57965600-57972600 Weak transcription Thymus Thymus
13 chr4:57966200-57975200 Weak transcription Lung lung
14 chr4:57966600-57969800 Enhancers Fetal Kidney kidney
15 chr4:57966800-57969800 Enhancers Colon Smooth Muscle Colon
16 chr4:57967000-57969800 Enhancers NHLF lung
17 chr4:57967000-57970200 Enhancers Fetal Stomach stomach
18 chr4:57967400-57969800 Enhancers Fetal Lung lung
19 chr4:57967400-57970600 Enhancers Fetal Muscle Leg muscle
20 chr4:57967600-57969800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr4:57967600-57969800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr4:57967600-57970000 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr4:57967800-57969800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr4:57967800-57970600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr4:57967800-57972600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr4:57967800-57973200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr4:57968000-57969800 Enhancers Brain Hippocampus Middle brain
28 chr4:57968000-57973000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr4:57968200-57969800 Flanking Active TSS Stomach Smooth Muscle stomach
30 chr4:57968200-57969800 Enhancers NHEK skin
31 chr4:57968400-57970200 Enhancers Fetal Brain Male brain
32 chr4:57968600-57970400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr4:57968800-57969800 Enhancers Aorta Aorta
34 chr4:57969000-57972000 Genic enhancers HUVEC blood vessel
35 chr4:57969200-57971400 Weak transcription Brain Angular Gyrus brain
36 chr4:57969400-57970200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr4:57969400-57971200 Weak transcription Brain Inferior Temporal Lobe brain
38 chr4:57969400-57971800 Enhancers A549 lung
39 chr4:57969600-57970400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr4:57969600-57970400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr4:57969600-57970400 Weak transcription Right Atrium heart
42 chr4:57969600-57970400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr4:57969600-57970800 Weak transcription ES-WA7 Cell Line embryonic stem cell
44 chr4:57969600-57970800 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr4:57969600-57970800 Enhancers Muscle Satellite Cultured Cells --
46 chr4:57969600-57970800 Weak transcription Brain Anterior Caudate brain
47 chr4:57969600-57970800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr4:57969600-57970800 Enhancers HSMMtube muscle
49 chr4:57969600-57971000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr4:57969600-57971000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015