Variant report

Variant	rs28683694
Chromosome Location	chr8:91531813-91531814
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10098239	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10103375	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10106046	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10109473	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13438978	0.82[EUR][1000 genomes]
rs28370967	0.82[EUR][1000 genomes]
rs28418603	0.82[EUR][1000 genomes]
rs28458242	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28523713	0.82[EUR][1000 genomes]
rs28571853	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28625286	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28628063	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28642916	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28646030	0.82[EUR][1000 genomes]
rs28654995	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28861773	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28884543	0.88[EUR][1000 genomes]
rs58288406	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59158124	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6995935	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73697720	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73697729	0.82[EUR][1000 genomes]
rs7825039	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv981885	chr8:91528144-91537088	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91522000-91532400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:91530600-91532000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr8:91531000-91532800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr8:91531400-91533600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr8:91531800-91532800	Enhancers	NH-A	brain
6	chr8:91531800-91533800	Enhancers	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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