Variant report

Variant	rs28732159
Chromosome Location	chr6:31633482-31633483
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT1	chr6:31633425-31634057	GM12878	blood:	n/a	chr6:31633551-31633563 chr6:31633839-31633851
2	NR2C2	chr6:31633017-31634103	GM12878	blood:	n/a	chr6:31633191-31633204
3	ZNF143	chr6:31632615-31634450	K562	blood:	n/a	chr6:31633784-31633802 chr6:31633614-31633632 chr6:31633725-31633743
4	POLR2A	chr6:31633122-31633670	A549	lung:	n/a	n/a
5	SRF	chr6:31633458-31633768	GM12878	blood:	n/a	n/a
6	HCFC1	chr6:31632027-31634910	Hela-S3	cervix:	n/a	n/a
7	MAFK	chr6:31632292-31634152	K562	blood:	n/a	n/a
8	TAF1	chr6:31633233-31633824	GM12892	blood:	n/a	n/a
9	TAF1	chr6:31633294-31633711	GM12892	blood:	n/a	n/a
10	REST	chr6:31632240-31634048	H1-neurons	neurons:	n/a	chr6:31633472-31633492 chr6:31633479-31633492
11	CUX1	chr6:31631866-31634258	K562	blood:	n/a	chr6:31633594-31633608
12	MYC	chr6:31632654-31634155	K562	blood:	n/a	chr6:31634058-31634068
13	BCLAF1	chr6:31632487-31634355	K562	blood:	n/a	chr6:31633646-31633655 chr6:31634115-31634124 chr6:31634061-31634070
14	ELF1	chr6:31633338-31634061	SK-N-SH	brain:	n/a	chr6:31633639-31633652
15	YY1	chr6:31632356-31634157	GM12892	blood:	n/a	chr6:31634060-31634069 chr6:31632755-31632777 chr6:31634061-31634072 chr6:31632766-31632774 chr6:31633161-31633172
16	ELF1	chr6:31632621-31634150	MCF-7	breast:	n/a	chr6:31632674-31632685 chr6:31633639-31633652
17	CTCF	chr6:31633217-31633955	K562	blood:	n/a	chr6:31633682-31633695 chr6:31633504-31633512
18	SP1	chr6:31632548-31633912	HepG2	liver:	n/a	chr6:31633308-31633318 chr6:31633669-31633678
19	GABPA	chr6:31632734-31634101	K562	blood:	n/a	chr6:31633670-31633679 chr6:31632825-31632836 chr6:31632948-31632957 chr6:31634060-31634069 chr6:31633643-31633650
20	POLR2A	chr6:31632705-31634221	MCF-7	breast:	n/a	n/a
21	POLR2A	chr6:31632353-31634300	SK-N-MC	brain:	n/a	n/a
22	ELK1	chr6:31631742-31634144	K562	blood:	n/a	chr6:31633646-31633655 chr6:31633646-31633655
23	STAT5A	chr6:31632431-31634415	GM12878	blood:	n/a	chr6:31634066-31634078 chr6:31633551-31633563 chr6:31633839-31633851 chr6:31633070-31633078
24	POLR2A	chr6:31632724-31633727	U87	brain:	n/a	n/a
25	CREB1	chr6:31633448-31633968	ECC-1	luminal epithelium:	n/a	n/a
26	MAX	chr6:31632427-31634207	SK-N-SH	brain:	n/a	chr6:31634058-31634068
27	POLR2A	chr6:31632451-31634149	SK-N-SH	brain:	n/a	n/a
28	POLR2A	chr6:31632965-31634090	Gliobla	brain:	n/a	n/a
29	POLR2A	chr6:31632506-31634185	PANC-1	pancreas:	n/a	n/a
30	ATF3	chr6:31631679-31633915	K562	blood:	n/a	chr6:31633492-31633501 chr6:31632951-31632971 chr6:31632950-31632959
31	TRIM28	chr6:31631410-31634096	K562	blood:	n/a	chr6:31633746-31633754
32	SP1	chr6:31633165-31634060	A549	lung:	n/a	chr6:31633308-31633318 chr6:31633669-31633678
33	NR2C2	chr6:31632905-31634074	HepG2	liver:	n/a	chr6:31633191-31633204
34	YY1	chr6:31632381-31633935	H1-hESC	embryonic stem cell:	n/a	chr6:31632755-31632777 chr6:31632766-31632774 chr6:31633161-31633172
35	RCOR1	chr6:31632635-31633806	GM12878	blood:	n/a	n/a
36	HNF4G	chr6:31632495-31634203	HepG2	liver:	n/a	chr6:31633191-31633205 chr6:31633814-31633827 chr6:31633810-31633822 chr6:31633814-31633827 chr6:31633809-31633831 chr6:31633191-31633205 chr6:31633193-31633205 chr6:31633191-31633204
37	YY1	chr6:31631619-31634169	K562	blood:	n/a	chr6:31634060-31634069 chr6:31632755-31632777 chr6:31634061-31634072 chr6:31632766-31632774 chr6:31633161-31633172
38	CHD2	chr6:31632789-31634181	HepG2	liver:	n/a	n/a
39	MTA3	chr6:31632175-31634692	GM12878	blood:	n/a	n/a
40	SMC3	chr6:31633467-31633761	Hela-S3	cervix:	n/a	n/a
41	TEAD4	chr6:31631617-31634618	K562	blood:	n/a	n/a
42	HCFC1	chr6:31631398-31634556	K562	blood:	n/a	n/a
43	SIX5	chr6:31633409-31634126	K562	blood:	n/a	n/a
44	SIN3AK20	chr6:31633320-31634168	HepG2	liver:	n/a	n/a
45	USF2	chr6:31632665-31633944	Hela-S3	cervix:	n/a	n/a
46	NFIC	chr6:31632533-31634013	HepG2	liver:	n/a	n/a
47	JUND	chr6:31632645-31633986	HepG2	liver:	n/a	n/a
48	CCNT2	chr6:31632705-31634099	K562	blood:	n/a	chr6:31634060-31634069 chr6:31633309-31633318
49	TAF1	chr6:31633306-31634141	MCF-7	breast:	n/a	n/a
50	CBX3	chr6:31631090-31634828	K562	blood:	n/a	chr6:31632567-31632578

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31633463-31633513	BJ	skin:	n/a
2	chr6:31633463-31633513	AG04449	skin:	fetal
3	chr6:31633463-31633513	GM12891	blood:	n/a
4	chr6:31633463-31633513	Hela-S3	cervix:	n/a
5	chr6:31633463-31633513	CMK	blood:	n/a
6	chr6:31633463-31633513	NB4	blood:	n/a
7	chr6:31633463-31633513	NT2-D1	testis:	n/a
8	chr6:31633463-31633513	HepG2	liver:	n/a
9	chr6:31633463-31633513	HNPCEpiC	eye:	n/a
10	chr6:31633463-31633513	HPAEpiC	pulmonary alveolar:	n/a
11	chr6:31633463-31633513	SAEC	small airway:	n/a
12	chr6:31633463-31633513	AG09309	skin:	n/a
13	chr6:31633463-31633513	AG09319	gingival:	n/a
14	chr6:31633463-31633513	HMEC	breast:	n/a
15	chr6:31633463-31633513	ProgFib	skin:	n/a
16	chr6:31633463-31633513	HUVEC	blood vessel:	n/a
17	chr6:31633463-31633513	HRPEpiC	eye:	n/a
18	chr6:31633463-31633513	HCT-116	colon:	n/a
19	chr6:31633463-31633513	AG04450	lung:	fetal
20	chr6:31633463-31633513	NHDF-neo	bronchial:	n/a
21	chr6:31633463-31633513	GM19239	blood:	n/a
22	chr6:31633463-31633513	MCF-7	breast:	n/a
23	chr6:31633463-31633513	U87	brain:	n/a
24	chr6:31633463-31633513	SKMC	muscle:	n/a
25	chr6:31633463-31633513	T-47D	breast:	n/a
26	chr6:31633463-31633513	H1-hESC	embryonic stem cell:	embryo
27	chr6:31633463-31633513	HCF	heart:	n/a
28	chr6:31633463-31633513	PrEC	prostate:	n/a
29	chr6:31633463-31633513	NH-A	brain:	n/a
30	chr6:31633463-31633513	BE2_C	brain:	n/a
31	chr6:31633463-31633513	IMR90	lung:	fetal
32	chr6:31633463-31633513	Jurkat	blood:	n/a
33	chr6:31633463-31633513	HIPEpiC	eye:	n/a
34	chr6:31633463-31633513	Caco-2	colon:	n/a
35	chr6:31633463-31633513	Hepatocyte	liver:	n/a
36	chr6:31633463-31633513	PANC-1	pancreas:	n/a
37	chr6:31633463-31633513	HEEpiC	esophagus:	n/a
38	chr6:31633463-31633513	RPTEC	kidney:	n/a
39	chr6:31633463-31633513	PFSK-1	brain:	n/a
40	chr6:31633463-31633513	HRCEpiC	kidney:	n/a
41	chr6:31633463-31633513	HAEpiC	amniotic membrane:	n/a
42	chr6:31633463-31633513	ovcar-3	ovarian:	n/a
43	chr6:31633463-31633513	K562	blood:	n/a
44	chr6:31633463-31633513	HRE	kidney:	n/a
45	chr6:31633463-31633513	SK-N-MC	brain:	n/a
46	chr6:31633463-31633513	NHBE	bronchial:	n/a
47	chr6:31633463-31633513	SK-N-SH_RA	brain:	n/a
48	chr6:31633463-31633513	HL-60	blood:	n/a
49	chr6:31633463-31633513	GM06990	blood:	n/a
50	chr6:31633463-31633513	GM12878	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:31630330..31634433-chr6:31829449..31833019,5	MCF-7	breast:
2	chr6:31630209..31635577-chr6:31828786..31834874,28	K562	blood:
3	chr6:31631113..31634365-chr6:31867924..31871902,6	K562	blood:
4	chr6:31506496..31512275-chr6:31630248..31634828,11	K562	blood:
5	chr17:48943309..48944124-chr6:31632947..31633592,2	Hela-S3	cervix:
6	chr19:6110549..6111141-chr6:31632986..31633742,2	Hela-S3	cervix:
7	chr6:31631384..31635745-chr6:32161942..32163949,3	K562	blood:
8	chr6:31620448..31621058-chr6:31633042..31633837,2	K562	blood:
9	chr6:31630940..31635916-chr6:31782579..31784659,6	MCF-7	breast:
10	chr6:31632734..31637057-chr6:31703384..31706202,6	MCF-7	breast:
11	chr6:31632296..31634965-chr6:31685541..31687886,2	MCF-7	breast:
12	chr6:31631824..31634552-chr6:31668867..31671892,6	MCF-7	breast:
13	chr6:26158032..26158973-chr6:31632895..31633618,2	Hela-S3	cervix:
14	chr6:31547676..31550388-chr6:31631712..31633963,2	K562	blood:
15	chr6:31632664..31635327-chr6:31741807..31745187,4	MCF-7	breast:
16	chr6:31633268..31634831-chr6:31923010..31925307,2	K562	blood:
17	chr6:31631207..31634109-chr6:31926807..31929140,3	K562	blood:
18	chr6:31630921..31635353-chr6:31802314..31807064,6	MCF-7	breast:
19	chr6:31505350..31512312-chr6:31630543..31635379,11	K562	blood:
20	chr15:90931126..90932010-chr6:31633142..31633798,2	Hela-S3	cervix:
21	chr6:31631384..31634257-chr6:32162297..32163949,2	K562	blood:
22	chr6:31588013..31588629-chr6:31632757..31633652,2	MCF-7	breast:
23	chr6:31586074..31595285-chr6:31626460..31635395,11	MCF-7	breast:
24	chr6:31632061..31634821-chr6:31925160..31927798,3	MCF-7	breast:
25	chr17:56708685..56709443-chr6:31633480..31634002,2	HCT-116	colon:
26	chr6:31632509..31634236-chr6:31853959..31856343,2	K562	blood:
27	chr6:31627970..31635325-chr6:31864036..31871429,12	K562	blood:
28	chr6:31633157..31635292-chr6:31669573..31672337,3	MCF-7	breast:
29	chr6:31628509..31634075-chr6:31935054..31938547,6	K562	blood:
30	chr6:31632488..31634160-chr6:31845506..31848503,2	MCF-7	breast:
31	chr6:31630694..31635339-chr6:31828920..31834068,22	K562	blood:
32	chr6:31632318..31634134-chr6:31707864..31709911,2	MCF-7	breast:
33	chr6:31512487..31517874-chr6:31628889..31634381,12	K562	blood:
34	chr6:31632224..31633782-chr6:32938836..32940645,2	K562	blood:
35	chr6:31630138..31633537-chr6:31702184..31707226,4	MCF-7	breast:
36	chr6:31632965..31635691-chr6:31725815..31728371,2	MCF-7	breast:
37	chr6:31515059..31516873-chr6:31633066..31634969,2	MCF-7	breast:
38	chr6:31512174..31516924-chr6:31632110..31634699,4	MCF-7	breast:
39	chr19:55918456..55919298-chr6:31633433..31634037,2	Hela-S3	cervix:
40	chr6:31631741..31634123-chr6:32936470..32938783,3	MCF-7	breast:
41	chr1:212208416..212209082-chr6:31633437..31633993,2	Hela-S3	cervix:
42	chr6:31632509..31634091-chr6:31794981..31797016,2	MCF-7	breast:
43	chr6:31633131..31635177-chr6:31694151..31697063,2	MCF-7	breast:
44	chr6:31632206..31634072-chr6:31697899..31700595,2	MCF-7	breast:
45	chr6:31632223..31634660-chr6:31938839..31941215,3	K562	blood:
46	chr6:31507927..31511187-chr6:31633283..31638231,4	MCF-7	breast:
47	chr6:31632814..31634832-chr6:31706820..31709460,2	MCF-7	breast:
48	chr19:14628651..14629497-chr6:31632863..31633880,3	Hela-S3	cervix:
49	chr6:30585114..30586870-chr6:31632529..31634643,2	K562	blood:
50	chr15:75932154..75932997-chr6:31632836..31633794,2	Hela-S3	cervix:

Variant related genes	Relation type
GPANK1	TF binding region
CSNK2B	TF binding region
ENSG00000263020	TF binding region
LY6G5B	TF binding region
C6orf47	TF binding region
LY6G5B	CpG island
CSNK2B	CpG island
C6orf47	CpG island
GPANK1	CpG island
ENSG00000263020	CpG island
ENSG00000254870	Chromatin interaction
ENSG00000213760	Chromatin interaction
ENSG00000204498	Chromatin interaction
ENSG00000204348	Chromatin interaction
ENSG00000141232	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000204389	Chromatin interaction
ENSG00000158373	Chromatin interaction
ENSG00000106462	Chromatin interaction
ENSG00000143493	Chromatin interaction
ENSG00000164877	Chromatin interaction
ENSG00000201823	Chromatin interaction
ENSG00000212195	Chromatin interaction
ENSG00000204388	Chromatin interaction
ENSG00000201754	Chromatin interaction
ENSG00000204344	Chromatin interaction
ENSG00000213719	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000204351	Chromatin interaction
ENSG00000087903	Chromatin interaction
ENSG00000227507	Chromatin interaction
ENSG00000204569	Chromatin interaction
ENSG00000204390	Chromatin interaction
ENSG00000225981	Chromatin interaction
ENSG00000223837	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000213654	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000204410	Chromatin interaction
ENSG00000204420	Chromatin interaction
ENSG00000213722	Chromatin interaction
ENSG00000132002	Chromatin interaction
ENSG00000204366	Chromatin interaction
ENSG00000204387	Chromatin interaction
ENSG00000204568	Chromatin interaction
ENSG00000204356	Chromatin interaction
ENSG00000204256	Chromatin interaction
ENSG00000266776	Chromatin interaction
ENSG00000204257	Chromatin interaction
ENSG00000204469	Chromatin interaction
ENSG00000204463	Chromatin interaction
ENSG00000200816	Chromatin interaction
ENSG00000143476	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000204385	Chromatin interaction
ENSG00000108106	Chromatin interaction
ENSG00000204396	Chromatin interaction
ENSG00000140553	Chromatin interaction
ENSG00000204427	Chromatin interaction
ENSG00000177971	Chromatin interaction
ENSG00000204386	Chromatin interaction
ENSG00000140575	Chromatin interaction
ENSG00000263756	Chromatin interaction
ENSG00000255152	Chromatin interaction
ENSG00000221267	Chromatin interaction
ENSG00000229980	Chromatin interaction

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs17207190	0.83[AMR][1000 genomes]
rs2516474	0.83[AMR][1000 genomes]
rs28381344	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs28732141	0.83[AMR][1000 genomes]
rs28732142	0.83[AMR][1000 genomes]
rs28732143	0.83[AMR][1000 genomes]
rs28732144	0.83[AMR][1000 genomes]
rs28732145	1.00[AMR][1000 genomes]
rs28732152	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs28732153	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs28732155	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs28732156	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs28732160	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs28732162	1.00[AMR][1000 genomes]
rs28732164	1.00[AMR][1000 genomes]
rs28732165	1.00[AMR][1000 genomes]
rs28732166	1.00[AMR][1000 genomes]
rs28895015	0.83[AMR][1000 genomes]
rs28895017	1.00[AMR][1000 genomes]
rs2905741	1.00[AMR][1000 genomes]
rs3093726	0.83[AMR][1000 genomes]
rs3093727	0.83[AMR][1000 genomes]
rs41293911	0.83[AMR][1000 genomes]
rs41293915	0.83[AMR][1000 genomes]
rs41293919	0.83[AMR][1000 genomes]
rs41293923	0.83[AMR][1000 genomes]
rs41315808	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7757383	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601609	chr6:31280101-31799786	Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
2	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
3	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
4	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
5	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
6	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
7	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
8	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
9	nsv432868	chr6:31338844-31721033	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	250 gene(s)	inside rSNPs	diseases
10	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
11	nsv830627	chr6:31496214-31659950	Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
12	nsv884418	chr6:31525448-31741078	Active TSS Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	206 gene(s)	inside rSNPs	diseases
13	nsv1033154	chr6:31550614-32009410	Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
14	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
15	esv3428142	chr6:31615800-31881809	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	257 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31631200-31634800	Active TSS	iPS-18 Cell Line	embryonic stem cell
2	chr6:31631400-31634200	Transcr. at gene 5' and 3'	Primary T helper naive cells fromperipheralblood	blood
3	chr6:31631400-31634400	Active TSS	iPS-15b Cell Line	embryonic stem cell
4	chr6:31631400-31634600	Active TSS	H9 Cell Line	embryonic stem cell
5	chr6:31631400-31634600	Active TSS	Aorta	Aorta
6	chr6:31631600-31634400	Active TSS	Fetal Kidney	kidney
7	chr6:31631600-31634600	Active TSS	Ovary	ovary
8	chr6:31631600-31634800	Active TSS	Pancreatic Islets	Pancreatic Islet
9	chr6:31631800-31634600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
10	chr6:31631800-31634600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr6:31631800-31634600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr6:31631800-31634600	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
13	chr6:31631800-31634800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr6:31632000-31634200	Active TSS	Fetal Lung	lung
15	chr6:31632000-31634400	Active TSS	ES-I3 Cell Line	embryonic stem cell
16	chr6:31632000-31634400	Active TSS	HUES48 Cell Line	embryonic stem cell
17	chr6:31632000-31634400	Active TSS	Colon Smooth Muscle	Colon
18	chr6:31632000-31634400	Active TSS	Fetal Heart	heart
19	chr6:31632000-31634400	Active TSS	Fetal Intestine Large	intestine
20	chr6:31632000-31634400	Active TSS	Small Intestine	intestine
21	chr6:31632000-31634600	Active TSS	iPS-20b Cell Line	embryonic stem cell
22	chr6:31632000-31634800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr6:31632200-31634000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr6:31632200-31634200	Active TSS	Brain Germinal Matrix	brain
25	chr6:31632200-31634200	Active TSS	Thymus	Thymus
26	chr6:31632200-31634400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
27	chr6:31632200-31634400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr6:31632200-31634400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr6:31632200-31634400	Active TSS	Breast Myoepithelial Primary Cells	Breast
30	chr6:31632200-31634400	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr6:31632200-31634600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr6:31632200-31634600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr6:31632200-31634600	Active TSS	Sigmoid Colon	Sigmoid Colon
34	chr6:31632200-31634600	Active TSS	NHDF-Ad	bronchial
35	chr6:31632200-31635400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
36	chr6:31632400-31634000	Active TSS	Placenta	Placenta
37	chr6:31632400-31634000	Active TSS	Dnd41	blood
38	chr6:31632400-31634200	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
39	chr6:31632400-31634200	Active TSS	Primary T killer memory cells from peripheral blood	blood
40	chr6:31632400-31634200	Active TSS	Brain Anterior Caudate	brain
41	chr6:31632400-31634200	Active TSS	Brain Hippocampus Middle	brain
42	chr6:31632400-31634200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
43	chr6:31632400-31634200	Active TSS	Fetal Adrenal Gland	Adrenal Gland
44	chr6:31632400-31634200	Active TSS	Fetal Muscle Trunk	muscle
45	chr6:31632400-31634200	Active TSS	Fetal Muscle Leg	muscle
46	chr6:31632400-31634200	Active TSS	Fetal Thymus	thymus
47	chr6:31632400-31634200	Active TSS	Rectal Smooth Muscle	rectum
48	chr6:31632400-31634200	Active TSS	Right Ventricle	heart
49	chr6:31632400-31634200	Active TSS	Skeletal Muscle Female	skeletal muscle
50	chr6:31632400-31634200	Active TSS	Spleen	Spleen

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