Variant report
| Variant | rs28751916 |
|---|---|
| Chromosome Location | chr3:178537683-178537684 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:42)
| rs_ID | r2[population] |
|---|---|
| rs11709071 | 0.88[AFR][1000 genomes] |
| rs11716970 | 0.88[AFR][1000 genomes] |
| rs11721205 | 0.88[AFR][1000 genomes] |
| rs11914342 | 0.87[AFR][1000 genomes] |
| rs11916314 | 0.86[AFR][1000 genomes] |
| rs11924270 | 0.80[AFR][1000 genomes] |
| rs11927700 | 0.88[AFR][1000 genomes] |
| rs11929676 | 0.88[AFR][1000 genomes] |
| rs13090876 | 0.85[AFR][1000 genomes] |
| rs28490096 | 0.88[AFR][1000 genomes] |
| rs28733874 | 0.88[AFR][1000 genomes] |
| rs4131862 | 0.88[AFR][1000 genomes] |
| rs4131863 | 0.88[AFR][1000 genomes] |
| rs60725021 | 0.87[AFR][1000 genomes] |
| rs6765556 | 0.86[AFR][1000 genomes] |
| rs6765682 | 0.86[AFR][1000 genomes] |
| rs6779867 | 0.88[AFR][1000 genomes] |
| rs6780023 | 0.89[AFR][1000 genomes] |
| rs6789905 | 0.86[AFR][1000 genomes] |
| rs6789945 | 0.86[AFR][1000 genomes] |
| rs6804163 | 0.88[AFR][1000 genomes] |
| rs6807583 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs73053720 | 0.88[AFR][1000 genomes] |
| rs73053731 | 0.88[AFR][1000 genomes] |
| rs73053734 | 0.88[AFR][1000 genomes] |
| rs73053748 | 0.84[AFR][1000 genomes] |
| rs7626641 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs9814677 | 0.86[AFR][1000 genomes] |
| rs9819352 | 0.86[AFR][1000 genomes] |
| rs9819394 | 0.88[AFR][1000 genomes] |
| rs9819552 | 0.87[AFR][1000 genomes] |
| rs9819671 | 0.86[AFR][1000 genomes] |
| rs9824836 | 0.85[AFR][1000 genomes] |
| rs9828010 | 0.88[AFR][1000 genomes] |
| rs9828148 | 0.88[AFR][1000 genomes] |
| rs9828153 | 0.88[AFR][1000 genomes] |
| rs9833798 | 0.85[AFR][1000 genomes] |
| rs9837702 | 0.86[AFR][1000 genomes] |
| rs9851600 | 0.86[AFR][1000 genomes] |
| rs9857688 | 0.87[AFR][1000 genomes] |
| rs9857760 | 0.88[AFR][1000 genomes] |
| rs9878489 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:178524000-178540800 | Weak transcription | Fetal Muscle Leg | muscle |
| 2 | chr3:178537400-178538800 | Weak transcription | Ovary | ovary |
