The 2.0 version of rSNPBase

Variant report

Variant rs28757390
Chromosome Location chr4:174315361-174315362
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:174293400-174321800 Weak transcription Pancreas Pancrea
2 chr4:174293400-174333200 Weak transcription Gastric stomach
3 chr4:174294000-174323800 Weak transcription HSMMtube muscle
4 chr4:174294000-174340400 Weak transcription Fetal Intestine Large intestine
5 chr4:174294200-174334400 Weak transcription Right Ventricle heart
6 chr4:174294200-174341600 Weak transcription Fetal Intestine Small intestine
7 chr4:174294400-174317400 Weak transcription Lung lung
8 chr4:174294400-174318600 Weak transcription Aorta Aorta
9 chr4:174294400-174320200 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr4:174294400-174322000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr4:174294400-174324600 Weak transcription Thymus Thymus
12 chr4:174294600-174338000 Weak transcription Fetal Brain Male brain
13 chr4:174294800-174318800 Weak transcription Fetal Brain Female brain
14 chr4:174294800-174334200 Weak transcription Primary hematopoietic stem cells blood
15 chr4:174294800-174336200 Weak transcription Adipose Nuclei Adipose
16 chr4:174294800-174341800 Weak transcription Duodenum Mucosa Duodenum
17 chr4:174295400-174331400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr4:174295400-174332200 Weak transcription Muscle Satellite Cultured Cells --
19 chr4:174295400-174335800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr4:174297200-174318600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr4:174297200-174319800 Weak transcription Fetal Thymus thymus
22 chr4:174297200-174333400 Weak transcription Fetal Muscle Leg muscle
23 chr4:174297200-174338000 Weak transcription Esophagus oesophagus
24 chr4:174297400-174318600 Weak transcription Colon Smooth Muscle Colon
25 chr4:174297400-174338000 Weak transcription Fetal Lung lung
26 chr4:174300200-174318800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr4:174300200-174339000 Weak transcription Ovary ovary
28 chr4:174300400-174333000 Weak transcription Fetal Stomach stomach
29 chr4:174301400-174318400 Weak transcription HSMM muscle
30 chr4:174303000-174333200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr4:174303200-174318800 Weak transcription Rectal Smooth Muscle rectum
32 chr4:174306200-174326400 Weak transcription Dnd41 blood
33 chr4:174310200-174318600 Weak transcription Brain Germinal Matrix brain
34 chr4:174310200-174318800 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr4:174311000-174318800 Weak transcription Stomach Smooth Muscle stomach
36 chr4:174312200-174318000 Strong transcription Primary monocytes fromperipheralblood blood
37 chr4:174312400-174318000 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr4:174312600-174316600 Weak transcription Brain Cingulate Gyrus brain
39 chr4:174313000-174316400 Weak transcription Brain Angular Gyrus brain
40 chr4:174313200-174316600 Weak transcription Brain Hippocampus Middle brain
41 chr4:174313200-174316600 Weak transcription Brain Substantia Nigra brain
42 chr4:174313200-174317400 Weak transcription Brain Inferior Temporal Lobe brain
43 chr4:174313200-174325800 Weak transcription Left Ventricle heart
44 chr4:174313600-174315400 Strong transcription Brain Anterior Caudate brain
45 chr4:174313800-174316200 Weak transcription Liver Liver
46 chr4:174313800-174317200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr4:174314000-174320000 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr4:174314200-174315400 Strong transcription Osteobl bone
49 chr4:174314200-174315600 Strong transcription Duodenum Smooth Muscle Duodenum
50 chr4:174314600-174315400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015