The 2.0 version of rSNPBase

Variant report

Variant rs28793596
Chromosome Location chr2:73010540-73010541
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72985200-73015800 Weak transcription Ovary ovary
2 chr2:72989400-73015800 Weak transcription Placenta Placenta
3 chr2:72990800-73018400 Weak transcription Aorta Aorta
4 chr2:72991200-73015800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr2:72991200-73015800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr2:72991200-73023000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:72999800-73022000 Weak transcription Right Ventricle heart
8 chr2:73002600-73011600 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr2:73002600-73012800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:73005400-73016200 Weak transcription Colon Smooth Muscle Colon
11 chr2:73005800-73011000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:73005800-73011200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr2:73005800-73012600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr2:73005800-73015800 Weak transcription Muscle Satellite Cultured Cells --
15 chr2:73005800-73016200 Weak transcription HSMM muscle
16 chr2:73006400-73011200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr2:73007200-73011600 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr2:73008000-73014200 Enhancers Fetal Heart heart
19 chr2:73008000-73016000 Weak transcription HMEC breast
20 chr2:73008400-73011000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr2:73008400-73012600 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr2:73008600-73011000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr2:73008600-73013200 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr2:73008600-73015600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr2:73008600-73020600 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr2:73008800-73010800 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr2:73008800-73011000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr2:73008800-73011000 Weak transcription Fetal Lung lung
29 chr2:73008800-73013400 Weak transcription Brain Cingulate Gyrus brain
30 chr2:73008800-73015600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:73008800-73016200 Weak transcription Brain Angular Gyrus brain
32 chr2:73008800-73016200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr2:73009000-73013400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr2:73009200-73012200 Weak transcription Left Ventricle heart
35 chr2:73009200-73021000 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr2:73010200-73012400 Weak transcription Brain Hippocampus Middle brain
37 chr2:73010200-73012400 Weak transcription Brain Inferior Temporal Lobe brain
38 chr2:73010200-73013400 Weak transcription Brain Substantia Nigra brain
39 chr2:73010200-73021000 Weak transcription Brain Anterior Caudate brain
40 chr2:73010400-73020400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015