Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11075774	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12102388	1.00[EUR][1000 genomes]
rs12102523	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12102525	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13335470	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13336968	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13338169	0.91[AMR][1000 genomes]
rs1902563	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28434516	1.00[EUR][1000 genomes]
rs28780486	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59710171	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs60020150	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60337219	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60611474	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60774382	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7186416	1.00[EUR][1000 genomes]
rs73575026	0.91[AMR][1000 genomes]
rs8056766	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8061423	1.00[EUR][1000 genomes]
rs8063038	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8064220	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9938385	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv14380	chr16:70650573-70660117	Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:70647400-70669200	Weak transcription	Right Atrium	heart
2	chr16:70647800-70664800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr16:70656200-70659000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr16:70657400-70658400	Active TSS	HUES6 Cell Line	embryonic stem cell
5	chr16:70657400-70658400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr16:70657400-70661400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr16:70657600-70658200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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