Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:70556957..70559700-chr16:70665193..70666930,2	MCF-7	breast:
2	chr16:70663642..70666612-chr16:70674243..70676912,2	K562	blood:

Variant related genes	Relation type
ENSG00000189091	Chromatin interaction
ENSG00000103051	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11075774	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12102388	1.00[EUR][1000 genomes]
rs12102523	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12102525	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13335470	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13336968	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13338169	1.00[AMR][1000 genomes]
rs1902563	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28434516	1.00[EUR][1000 genomes]
rs28780486	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28814369	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28868985	0.83[AMR][1000 genomes]
rs59710171	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60020150	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60337219	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60611474	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60774382	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7186416	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73575026	1.00[AMR][1000 genomes]
rs8056766	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8061423	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8064220	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9938385	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:70647400-70669200	Weak transcription	Right Atrium	heart
2	chr16:70659200-70668800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr16:70661200-70669000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr16:70663000-70666400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr16:70663000-70669000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr16:70663400-70668800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr16:70665200-70668800	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr16:70665200-70669000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr16:70665400-70669200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr16:70665400-70669200	Weak transcription	Fetal Intestine Small	intestine
11	chr16:70665600-70666200	Enhancers	Fetal Muscle Leg	muscle
12	chr16:70665600-70666200	Enhancers	Ovary	ovary
13	chr16:70665600-70666600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr16:70665600-70668800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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