The 2.0 version of rSNPBase

Variant report

Variant rs288335
Chromosome Location chr2:183620214-183620215
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:183581800-183622600 Weak transcription Colonic Mucosa Colon
2 chr2:183581800-183631000 Weak transcription Esophagus oesophagus
3 chr2:183581800-183647600 Weak transcription Gastric stomach
4 chr2:183581800-183655600 Weak transcription Pancreas Pancrea
5 chr2:183582600-183624400 Weak transcription Stomach Mucosa stomach
6 chr2:183588600-183624200 Weak transcription Small Intestine intestine
7 chr2:183591400-183622600 Weak transcription Brain Germinal Matrix brain
8 chr2:183602600-183622600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr2:183602600-183624200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr2:183603200-183622400 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr2:183605600-183646000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr2:183606000-183622800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr2:183606000-183624200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr2:183607200-183622600 Weak transcription Rectal Smooth Muscle rectum
15 chr2:183607200-183638800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:183608000-183621400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:183608000-183622800 Weak transcription Thymus Thymus
18 chr2:183608000-183624200 Weak transcription Fetal Stomach stomach
19 chr2:183608000-183628200 Weak transcription Fetal Intestine Small intestine
20 chr2:183609000-183646600 Weak transcription Hela-S3 cervix
21 chr2:183609600-183622800 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr2:183610000-183638800 Weak transcription Lung lung
23 chr2:183610200-183620800 Weak transcription H9 Cell Line embryonic stem cell
24 chr2:183610200-183621000 Weak transcription HSMMtube muscle
25 chr2:183610200-183622400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr2:183610200-183622600 Weak transcription Brain Cingulate Gyrus brain
27 chr2:183610200-183622600 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr2:183610200-183623800 Weak transcription Psoas Muscle Psoas
29 chr2:183610200-183624400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr2:183610200-183624400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr2:183610200-183624400 Weak transcription Aorta Aorta
32 chr2:183610200-183626000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr2:183610200-183626600 Weak transcription Brain Hippocampus Middle brain
34 chr2:183610200-183628400 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr2:183610200-183631400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr2:183610200-183633200 Weak transcription Spleen Spleen
37 chr2:183610200-183639000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr2:183610400-183620600 Weak transcription Placenta Placenta
39 chr2:183610400-183621000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr2:183610400-183621000 Weak transcription NHLF lung
41 chr2:183610400-183622800 Weak transcription Brain Angular Gyrus brain
42 chr2:183610800-183622800 Weak transcription Brain Substantia Nigra brain
43 chr2:183613200-183625000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr2:183613400-183624200 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr2:183614400-183626400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr2:183614400-183626400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr2:183614400-183626600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr2:183614400-183631200 Strong transcription HUES64 Cell Line embryonic stem cell
49 chr2:183614400-183632200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr2:183614400-183632400 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015