The 2.0 version of rSNPBase

Variant report

Variant rs28862718
Chromosome Location chr4:26587110-26587111
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:26584800-26587200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr4:26585000-26587600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
3 chr4:26585000-26588800 Active TSS Fetal Thymus thymus
4 chr4:26585400-26587600 Active TSS NHLF lung
5 chr4:26585400-26587800 Active TSS NH-A brain
6 chr4:26585400-26589000 Active TSS Muscle Satellite Cultured Cells --
7 chr4:26585600-26587400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
8 chr4:26586200-26588000 Flanking Active TSS Dnd41 blood
9 chr4:26586400-26587200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr4:26586400-26587200 Weak transcription Lung lung
11 chr4:26586400-26587400 Weak transcription Small Intestine intestine
12 chr4:26586400-26587600 Enhancers Primary T helper cells fromperipheralblood blood
13 chr4:26586400-26587800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr4:26586400-26589800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr4:26586400-26590800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr4:26586400-26591000 Weak transcription Esophagus oesophagus
17 chr4:26586400-26591000 Weak transcription Gastric stomach
18 chr4:26586600-26587200 Enhancers Cortex derived primary cultured neurospheres brain
19 chr4:26586600-26587600 Enhancers Primary T cells fromperipheralblood blood
20 chr4:26586600-26588000 Enhancers Primary T helper cells PMA-I stimulated --
21 chr4:26586600-26588200 Active TSS Osteobl bone
22 chr4:26586600-26590600 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr4:26586600-26590800 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr4:26586600-26590800 Weak transcription H1 Cell Line embryonic stem cell
25 chr4:26586600-26590800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr4:26586600-26591000 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr4:26586600-26601000 Weak transcription Primary hematopoietic stem cells blood
28 chr4:26586800-26587200 Weak transcription H9 Cell Line embryonic stem cell
29 chr4:26586800-26587200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr4:26586800-26587200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr4:26586800-26587200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
32 chr4:26586800-26587200 Enhancers Brain Hippocampus Middle brain
33 chr4:26586800-26587400 Enhancers HUVEC blood vessel
34 chr4:26586800-26587800 Weak transcription Liver Liver
35 chr4:26586800-26587800 Enhancers Colon Smooth Muscle Colon
36 chr4:26586800-26588400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr4:26586800-26590800 Weak transcription K562 blood
38 chr4:26586800-26591000 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr4:26586800-26591200 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr4:26586800-26591400 Weak transcription A549 lung
41 chr4:26586800-26592400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr4:26586800-26592600 Weak transcription HSMM muscle
43 chr4:26586800-26593400 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr4:26587000-26587200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr4:26587000-26587200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr4:26587000-26587200 Active TSS Thymus Thymus
47 chr4:26587000-26587200 Enhancers NHDF-Ad bronchial
48 chr4:26587000-26587400 Enhancers Primary Natural Killer cells fromperipheralblood blood
49 chr4:26587000-26587400 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr4:26587000-26587600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015