The 2.0 version of rSNPBase

Variant report

Variant rs28912672
Chromosome Location chr7:7758286-7758287
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:7737600-7778800 Weak transcription Primary hematopoietic stem cells blood
2 chr7:7740000-7759000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr7:7743600-7762800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr7:7743600-7772800 Weak transcription Gastric stomach
5 chr7:7745600-7758800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr7:7746000-7762400 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr7:7747800-7763800 Weak transcription Left Ventricle heart
8 chr7:7748200-7772200 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr7:7749200-7758800 Weak transcription Primary T cells from cord blood blood
10 chr7:7749200-7770800 Weak transcription Small Intestine intestine
11 chr7:7750800-7760400 Weak transcription Primary B cells from cord blood blood
12 chr7:7752600-7790400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr7:7753800-7758400 Weak transcription Brain Germinal Matrix brain
14 chr7:7754800-7758600 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr7:7755400-7772800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr7:7756800-7765600 Weak transcription Fetal Intestine Small intestine
17 chr7:7757000-7758600 Enhancers Dnd41 blood
18 chr7:7757000-7770600 Weak transcription Pancreas Pancrea
19 chr7:7757200-7760000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr7:7757600-7758600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr7:7757800-7760800 Weak transcription Primary B cells from peripheral blood blood
22 chr7:7758000-7759400 Enhancers A549 lung
23 chr7:7758000-7759600 Enhancers Primary T helper cells PMA-I stimulated --
24 chr7:7758000-7760200 Enhancers HSMM muscle
25 chr7:7758200-7758600 Enhancers Brain Anterior Caudate brain
26 chr7:7758200-7758600 Enhancers Brain Hippocampus Middle brain
27 chr7:7758200-7758600 Enhancers Brain Inferior Temporal Lobe brain
28 chr7:7758200-7758800 Enhancers GM12878-XiMat blood
29 chr7:7758200-7759200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr7:7758200-7759600 Enhancers NHEK skin
31 chr7:7758200-7760000 Enhancers Muscle Satellite Cultured Cells --
32 chr7:7758200-7761000 Enhancers Hela-S3 cervix
33 chr7:7758200-7761600 Enhancers Fetal Thymus thymus

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Last update: Aug 31, 2015