The 2.0 version of rSNPBase

Variant report

Variant rs28914532
Chromosome Location chr1:179090751-179090752
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179053200-179096000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:179059200-179096400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr1:179063200-179112000 Weak transcription Fetal Kidney kidney
4 chr1:179064800-179097800 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:179074200-179091000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:179075200-179091200 Strong transcription NHLF lung
7 chr1:179075400-179091000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:179075400-179091400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:179075400-179096200 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr1:179076200-179093400 Strong transcription Fetal Stomach stomach
11 chr1:179076600-179092800 Strong transcription NH-A brain
12 chr1:179077600-179094000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:179077800-179091000 Strong transcription Adipose Nuclei Adipose
14 chr1:179078000-179091200 Strong transcription HSMMtube muscle
15 chr1:179078600-179097600 Weak transcription Stomach Mucosa stomach
16 chr1:179079600-179109800 Weak transcription Small Intestine intestine
17 chr1:179080000-179090800 Weak transcription Fetal Heart heart
18 chr1:179080000-179090800 Weak transcription Pancreas Pancrea
19 chr1:179080000-179097800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr1:179080000-179097800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:179080000-179098600 Weak transcription Esophagus oesophagus
22 chr1:179080200-179095800 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr1:179080200-179101600 Weak transcription Fetal Brain Male brain
24 chr1:179080400-179103800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:179080800-179098400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:179080800-179099000 Weak transcription Colonic Mucosa Colon
27 chr1:179080800-179099000 Weak transcription Spleen Spleen
28 chr1:179083200-179090800 Strong transcription Fetal Brain Female brain
29 chr1:179084000-179093200 Strong transcription Fetal Intestine Large intestine
30 chr1:179085000-179091000 Strong transcription Primary T cells from cord blood blood
31 chr1:179085000-179091000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:179085200-179094000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:179085400-179090800 Strong transcription Duodenum Mucosa Duodenum
34 chr1:179085400-179091000 Strong transcription Placenta Placenta
35 chr1:179085400-179091200 Strong transcription Fetal Muscle Trunk muscle
36 chr1:179085400-179093200 Strong transcription Fetal Muscle Leg muscle
37 chr1:179085400-179095000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr1:179085800-179091000 Strong transcription Fetal Adrenal Gland Adrenal Gland
39 chr1:179086400-179091000 Strong transcription HepG2 liver
40 chr1:179086400-179095400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:179086600-179105000 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr1:179086800-179099000 Weak transcription Right Ventricle heart
43 chr1:179087800-179094600 Weak transcription Stomach Smooth Muscle stomach
44 chr1:179087800-179097800 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr1:179087800-179113000 Weak transcription Placenta Amnion Placenta Amnion
46 chr1:179088000-179096400 Weak transcription Brain Substantia Nigra brain
47 chr1:179088000-179097800 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr1:179088000-179098400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:179088000-179098600 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr1:179088000-179099000 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015