Variant report

Variant rs2893554
Chromosome Location chr7:38350808-38350809
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38329800-38351000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr7:38350000-38351600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr7:38350000-38351600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
4 chr7:38350200-38351000 Enhancers Lung lung
5 chr7:38350200-38351400 Active TSS Colon Smooth Muscle Colon
6 chr7:38350200-38351400 Enhancers Fetal Heart heart
7 chr7:38350200-38351400 Active TSS Rectal Smooth Muscle rectum
8 chr7:38350200-38351600 Flanking Active TSS Primary monocytes fromperipheralblood blood
9 chr7:38350200-38351600 Flanking Active TSS Primary hematopoietic stem cells blood
10 chr7:38350200-38351600 Active TSS Duodenum Mucosa Duodenum
11 chr7:38350200-38352200 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr7:38350400-38351000 Active TSS Primary T helper memory cells from peripheral blood 1 blood
13 chr7:38350400-38351200 Active TSS Primary T cells fromperipheralblood blood
14 chr7:38350400-38351200 Active TSS Fetal Intestine Small intestine
15 chr7:38350400-38351200 Active TSS Fetal Thymus thymus
16 chr7:38350400-38351400 Active TSS Primary T helper naive cells fromperipheralblood blood
17 chr7:38350400-38351400 Active TSS Primary T regulatory cells fromperipheralblood blood
18 chr7:38350400-38351400 Active TSS Primary T killer naive cells fromperipheralblood blood
19 chr7:38350400-38351600 Active TSS iPS-15b Cell Line embryonic stem cell
20 chr7:38350400-38351600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
21 chr7:38350400-38351600 Active TSS Primary T helper cells fromperipheralblood blood
22 chr7:38350400-38351600 Active TSS Fetal Kidney kidney
23 chr7:38350400-38351600 Active TSS Pancreatic Islets Pancreatic Islet
24 chr7:38350400-38352200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr7:38350400-38352600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr7:38350400-38357200 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr7:38350600-38351000 Active TSS Primary T cells from cord blood blood
28 chr7:38350600-38351000 Flanking Active TSS Brain Hippocampus Middle brain
29 chr7:38350600-38351000 Active TSS Fetal Muscle Leg muscle
30 chr7:38350600-38351000 Bivalent/Poised TSS Fetal Stomach stomach
31 chr7:38350600-38351000 Weak transcription Gastric stomach
32 chr7:38350600-38351000 Active TSS Right Atrium heart
33 chr7:38350600-38351000 Weak transcription Spleen Spleen
34 chr7:38350600-38351200 Active TSS Primary T helper cells PMA-I stimulated --
35 chr7:38350600-38351200 Active TSS Primary Natural Killer cells fromperipheralblood blood
36 chr7:38350600-38351200 Active TSS Muscle Satellite Cultured Cells --
37 chr7:38350600-38351200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
38 chr7:38350600-38351200 Active TSS Adipose Nuclei Adipose
39 chr7:38350600-38351200 Active TSS Brain Inferior Temporal Lobe brain
40 chr7:38350600-38351200 Active TSS Fetal Intestine Large intestine
41 chr7:38350600-38351200 Active TSS Ovary ovary
42 chr7:38350600-38351200 Active TSS Skeletal Muscle Male skeletal muscle
43 chr7:38350600-38351200 Active TSS GM12878-XiMat blood
44 chr7:38350600-38351400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr7:38350600-38351400 Flanking Bivalent TSS/Enh Primary B cells from peripheral blood blood
46 chr7:38350600-38351400 Active TSS Brain Substantia Nigra brain
47 chr7:38350600-38351400 Active TSS Fetal Adrenal Gland Adrenal Gland
48 chr7:38350600-38351400 Active TSS Fetal Brain Female brain
49 chr7:38350600-38351600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr7:38350600-38351600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin

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