The 2.0 version of rSNPBase

Variant report

Variant rs2911576
Chromosome Location chr1:85163201-85163202
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85157000-85164000 Weak transcription Fetal Lung lung
2 chr1:85157000-85164600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:85157200-85163400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr1:85157200-85163800 Weak transcription Brain Hippocampus Middle brain
5 chr1:85157400-85163400 Weak transcription Fetal Muscle Leg muscle
6 chr1:85157400-85164000 Weak transcription Fetal Brain Female brain
7 chr1:85157400-85167200 Weak transcription Psoas Muscle Psoas
8 chr1:85158200-85164000 Weak transcription Brain Substantia Nigra brain
9 chr1:85158600-85163400 Weak transcription Stomach Mucosa stomach
10 chr1:85158800-85163400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:85159000-85163400 Weak transcription Small Intestine intestine
12 chr1:85159000-85163800 Weak transcription Fetal Kidney kidney
13 chr1:85159000-85164000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:85159200-85163800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:85159200-85164800 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr1:85159600-85164000 Weak transcription Fetal Thymus thymus
17 chr1:85159600-85164200 Weak transcription Primary T cells from cord blood blood
18 chr1:85162600-85164200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:85162800-85163400 Enhancers NHDF-Ad bronchial
20 chr1:85162800-85163800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:85162800-85164000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:85162800-85165200 Enhancers Fetal Stomach stomach
23 chr1:85162800-85165200 Enhancers Stomach Smooth Muscle stomach
24 chr1:85162800-85166200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:85162800-85166200 Enhancers Fetal Brain Male brain
26 chr1:85162800-85166200 Enhancers Fetal Intestine Large intestine
27 chr1:85162800-85166400 Enhancers Fetal Intestine Small intestine
28 chr1:85163000-85163600 Enhancers Esophagus oesophagus
29 chr1:85163000-85164000 Enhancers Muscle Satellite Cultured Cells --
30 chr1:85163000-85164200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:85163000-85164200 Enhancers NHLF lung
32 chr1:85163000-85164800 Enhancers iPS-20b Cell Line embryonic stem cell
33 chr1:85163000-85164800 Enhancers HSMM muscle
34 chr1:85163000-85165200 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr1:85163000-85165200 Enhancers HMEC breast
36 chr1:85163000-85166200 Enhancers K562 blood
37 chr1:85163000-85166400 Enhancers Colon Smooth Muscle Colon
38 chr1:85163000-85168400 Enhancers Rectal Smooth Muscle rectum
39 chr1:85163200-85163600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
40 chr1:85163200-85164000 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr1:85163200-85164000 Enhancers Osteobl bone
42 chr1:85163200-85164200 Weak transcription Aorta Aorta
43 chr1:85163200-85164200 Enhancers NH-A brain
44 chr1:85163200-85164400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
45 chr1:85163200-85164800 Enhancers HUES6 Cell Line embryonic stem cell
46 chr1:85163200-85164800 Enhancers HSMMtube muscle
47 chr1:85163200-85165000 Enhancers H1 Cell Line embryonic stem cell
48 chr1:85163200-85165000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:85163200-85165200 Enhancers HUES48 Cell Line embryonic stem cell
50 chr1:85163200-85165200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015