Variant report

Variant	rs291465
Chromosome Location	chr2:191182961-191182962
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:191170524..191172788-chr2:191180838..191183387,2	K562	blood:
2	chr2:190952176..190953919-chr2:191181749..191183612,2	MCF-7	breast:
3	chr2:191170524..191173911-chr2:191180343..191183387,4	K562	blood:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10182490	1.00[CEU][hapmap];0.91[JPT][hapmap]
rs13406328	1.00[CEU][hapmap]
rs1366676	1.00[CEU][hapmap];0.91[JPT][hapmap]
rs1595997	1.00[CEU][hapmap];0.91[JPT][hapmap];0.82[YRI][hapmap];0.80[ASN][1000 genomes]
rs16832459	1.00[CEU][hapmap]
rs16832573	0.92[JPT][hapmap]
rs2067383	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2119464	0.80[ASN][1000 genomes]
rs2582734	1.00[CEU][hapmap];0.91[JPT][hapmap];0.80[ASN][1000 genomes]
rs2582741	1.00[CEU][hapmap];0.91[JPT][hapmap];0.87[YRI][hapmap];0.80[ASN][1000 genomes]
rs2582756	1.00[CEU][hapmap];0.91[JPT][hapmap]
rs2582768	0.80[ASN][1000 genomes]
rs2664250	0.80[ASN][1000 genomes]
rs2664254	1.00[CEU][hapmap];0.80[ASN][1000 genomes]
rs2664257	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs291406	1.00[CEU][hapmap];0.91[JPT][hapmap];0.85[YRI][hapmap]
rs291408	0.82[JPT][hapmap]
rs291416	1.00[CEU][hapmap];0.91[JPT][hapmap]
rs291433	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs291443	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs291454	1.00[CEU][hapmap];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs291471	0.80[ASN][1000 genomes]
rs291473	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs59924974	0.91[ASN][1000 genomes]

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:191116600-191183200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
2	chr2:191117400-191183600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr2:191135600-191183200	Weak transcription	Fetal Brain Male	brain
4	chr2:191137400-191183200	Weak transcription	A549	lung
5	chr2:191141800-191183000	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr2:191143000-191183000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr2:191145600-191183200	Weak transcription	HUVEC	blood vessel
8	chr2:191145800-191183000	Weak transcription	HMEC	breast
9	chr2:191149200-191183200	Weak transcription	Fetal Kidney	kidney
10	chr2:191151000-191183000	Weak transcription	Esophagus	oesophagus
11	chr2:191151400-191183000	Weak transcription	Gastric	stomach
12	chr2:191151400-191183000	Weak transcription	Rectal Smooth Muscle	rectum
13	chr2:191151400-191183600	Weak transcription	Thymus	Thymus
14	chr2:191161400-191183600	Weak transcription	Ovary	ovary
15	chr2:191165400-191183000	Weak transcription	Fetal Brain Female	brain
16	chr2:191166200-191183200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr2:191167000-191183000	Weak transcription	Brain Germinal Matrix	brain
18	chr2:191167600-191183200	Weak transcription	Monocytes-CD14+_RO01746	blood
19	chr2:191168000-191183000	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr2:191168000-191183200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr2:191168600-191183000	Weak transcription	Fetal Lung	lung
22	chr2:191171400-191183000	Weak transcription	Sigmoid Colon	Sigmoid Colon
23	chr2:191171600-191183000	Weak transcription	Lung	lung
24	chr2:191172600-191183600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr2:191173600-191183000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr2:191173800-191183200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
27	chr2:191174800-191183000	Weak transcription	Left Ventricle	heart
28	chr2:191175000-191183000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr2:191175600-191183000	Weak transcription	Primary monocytes fromperipheralblood	blood
30	chr2:191175600-191183000	Weak transcription	Placenta	Placenta
31	chr2:191175600-191183200	Weak transcription	HUES48 Cell Line	embryonic stem cell
32	chr2:191175600-191183200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
33	chr2:191175800-191183000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr2:191175800-191183000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr2:191175800-191183000	Weak transcription	HUES64 Cell Line	embryonic stem cell
36	chr2:191177000-191183000	Weak transcription	Psoas Muscle	Psoas
37	chr2:191177200-191183000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr2:191177400-191183000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
39	chr2:191178000-191183200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
40	chr2:191178400-191183000	Weak transcription	H1 Cell Line	embryonic stem cell
41	chr2:191178800-191183000	Weak transcription	Rectal Mucosa Donor 29	rectum
42	chr2:191178800-191183000	Weak transcription	Stomach Smooth Muscle	stomach
43	chr2:191179600-191183000	Weak transcription	NHLF	lung
44	chr2:191179800-191183000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr2:191179800-191183000	Enhancers	Brain Anterior Caudate	brain
46	chr2:191180200-191183000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr2:191180400-191183000	Weak transcription	Duodenum Smooth Muscle	Duodenum
48	chr2:191180400-191183000	Weak transcription	Fetal Heart	heart
49	chr2:191180400-191183200	Weak transcription	NH-A	brain
50	chr2:191180800-191183000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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