Variant report

Variant	rs293055
Chromosome Location	chr5:94225877-94225878
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:94213491..94215711-chr5:94223968..94226547,2	K562	blood:
2	chr5:94225688..94227827-chr5:94229765..94231426,2	K562	blood:

rs_ID	r²[population]
rs39988	0.81[AFR][1000 genomes]
rs40590	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs469067	0.88[AFR][1000 genomes]
rs469844	0.82[AFR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94165000-94240800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr5:94191000-94232200	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr5:94200800-94236600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr5:94204400-94240600	Weak transcription	Lung	lung
5	chr5:94206800-94230000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr5:94207000-94227000	Weak transcription	Primary hematopoietic stem cells	blood
7	chr5:94207200-94230000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr5:94207200-94240400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr5:94218000-94231000	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr5:94220200-94238200	Weak transcription	Psoas Muscle	Psoas
11	chr5:94220800-94229200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr5:94220800-94230000	Weak transcription	Fetal Brain Female	brain
13	chr5:94221000-94229200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
14	chr5:94221600-94226800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr5:94222400-94227000	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr5:94223800-94227200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr5:94224600-94227000	Weak transcription	Primary neutrophils fromperipheralblood	blood
18	chr5:94224800-94229200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
19	chr5:94224800-94229200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr5:94224800-94230200	Weak transcription	HUVEC	blood vessel
21	chr5:94225000-94234800	Weak transcription	Primary T cells from cord blood	blood
22	chr5:94225200-94236200	Weak transcription	GM12878-XiMat	blood
23	chr5:94225800-94241600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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