Variant report

Variant	rs2939977
Chromosome Location	chr8:59083786-59083787
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1354816	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1395614	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2048104	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2939976	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55648610	0.90[ASN][1000 genomes]
rs59326943	0.88[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59068400-59085000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:59081600-59084000	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr8:59082400-59085200	Weak transcription	Fetal Muscle Leg	muscle
4	chr8:59082800-59083800	Weak transcription	HepG2	liver
5	chr8:59083200-59085800	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr8:59083400-59087000	Enhancers	Primary monocytes fromperipheralblood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links