Variant report

Variant	rs1395614
Chromosome Location	chr8:59081551-59081552
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1354816	0.85[EUR][1000 genomes]
rs1848179	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2048104	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2063103	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2939971	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2939976	0.85[EUR][1000 genomes]
rs2939977	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2977388	1.00[ASN][1000 genomes]
rs6995967	1.00[CHB][hapmap]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59068400-59085000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:59074800-59083200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr8:59075000-59082000	Weak transcription	Fetal Muscle Leg	muscle
4	chr8:59080200-59082800	Enhancers	GM12878-XiMat	blood
5	chr8:59080800-59081600	Enhancers	HepG2	liver
6	chr8:59080800-59081800	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr8:59081200-59081600	Enhancers	Monocytes-CD14+_RO01746	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links