The 2.0 version of rSNPBase

Variant report

Variant rs2948072
Chromosome Location chr1:155750326-155750327
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155715400-155789200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:155715600-155764600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:155716000-155793400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:155716600-155781800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:155717200-155761000 Strong transcription Fetal Stomach stomach
6 chr1:155717400-155795800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr1:155720200-155750600 Strong transcription Primary hematopoietic stem cells short term culture blood
8 chr1:155720200-155755800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr1:155720200-155756200 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr1:155720200-155756600 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr1:155720200-155798200 Strong transcription Fetal Thymus thymus
12 chr1:155720200-155803600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:155720400-155750400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:155720400-155750600 Strong transcription Dnd41 blood
15 chr1:155720400-155755600 Strong transcription Placenta Placenta
16 chr1:155720400-155756400 Strong transcription Liver Liver
17 chr1:155720400-155760800 Strong transcription Primary T cells fromperipheralblood blood
18 chr1:155720400-155796800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
19 chr1:155720600-155757200 Strong transcription Primary T regulatory cells fromperipheralblood blood
20 chr1:155727200-155754200 Strong transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:155730400-155764200 Weak transcription Psoas Muscle Psoas
22 chr1:155732200-155789200 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr1:155732400-155755600 Strong transcription Fetal Intestine Large intestine
24 chr1:155734600-155750800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:155734800-155756600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr1:155737200-155772200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr1:155738400-155750600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:155743000-155763400 Weak transcription HMEC breast
29 chr1:155743200-155773400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr1:155743600-155754600 Weak transcription Colonic Mucosa Colon
31 chr1:155743600-155762200 Weak transcription NHDF-Ad bronchial
32 chr1:155744200-155757600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:155744600-155750600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr1:155744600-155754600 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr1:155745200-155761000 Strong transcription Fetal Intestine Small intestine
36 chr1:155745600-155753000 Weak transcription Brain Angular Gyrus brain
37 chr1:155746200-155754600 Weak transcription Small Intestine intestine
38 chr1:155746400-155774000 Weak transcription Pancreas Pancrea
39 chr1:155746400-155791400 Weak transcription Stomach Mucosa stomach
40 chr1:155746600-155763400 Weak transcription Spleen Spleen
41 chr1:155746800-155750400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:155746800-155752000 Weak transcription Primary hematopoietic stem cells blood
43 chr1:155746800-155753000 Weak transcription HSMMtube muscle
44 chr1:155746800-155756200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr1:155746800-155758600 Strong transcription Primary monocytes fromperipheralblood blood
46 chr1:155747000-155751800 Weak transcription HUVEC blood vessel
47 chr1:155747000-155753000 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr1:155747000-155763000 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr1:155747000-155764200 Weak transcription Brain Substantia Nigra brain
50 chr1:155747200-155754000 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015