Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10053277	0.85[ASN][1000 genomes]
rs10061873	0.85[ASN][1000 genomes]
rs17452090	0.85[ASN][1000 genomes]
rs17549488	0.82[CHB][hapmap]
rs28663290	0.85[ASN][1000 genomes]
rs28687145	0.85[ASN][1000 genomes]
rs2909954	0.86[AFR][1000 genomes]
rs2909955	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2961737	0.85[ASN][1000 genomes]
rs2961738	0.85[ASN][1000 genomes]
rs2961747	0.85[ASN][1000 genomes]
rs2961772	0.87[ASN][1000 genomes]
rs4407620	0.85[ASN][1000 genomes]
rs4475248	0.85[ASN][1000 genomes]
rs4569857	0.85[ASN][1000 genomes]
rs4958557	0.85[ASN][1000 genomes]
rs4958559	0.85[ASN][1000 genomes]
rs55748286	0.85[ASN][1000 genomes]
rs55858427	0.85[ASN][1000 genomes]
rs56012817	0.85[ASN][1000 genomes]
rs6868942	0.84[ASN][1000 genomes]
rs72795354	0.85[ASN][1000 genomes]
rs765674	0.84[AFR][1000 genomes]
rs765676	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023828	chr5:151522149-151956217	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151890400-151892800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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