Variant report

Variant rs2962990
Chromosome Location chr15:57350965-57350966
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57324600-57355800 Weak transcription Primary B cells from cord blood blood
2 chr15:57324600-57398600 Weak transcription Fetal Muscle Leg muscle
3 chr15:57328200-57353600 Weak transcription Pancreas Pancrea
4 chr15:57328600-57355000 Weak transcription Dnd41 blood
5 chr15:57329800-57351400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr15:57332000-57355800 Weak transcription Primary B cells from peripheral blood blood
7 chr15:57336600-57371800 Weak transcription K562 blood
8 chr15:57337600-57351200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr15:57339600-57355600 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr15:57339800-57361600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr15:57340200-57372600 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr15:57343800-57363400 Weak transcription Aorta Aorta
13 chr15:57344000-57351400 Weak transcription Fetal Brain Female brain
14 chr15:57344400-57351400 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr15:57344600-57363600 Weak transcription Right Atrium heart
16 chr15:57346000-57374400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr15:57346400-57352800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr15:57346600-57355000 Weak transcription Primary hematopoietic stem cells blood
19 chr15:57346800-57351400 Weak transcription HSMMtube muscle
20 chr15:57347000-57373400 Weak transcription Fetal Intestine Small intestine
21 chr15:57347200-57356200 Weak transcription Fetal Kidney kidney
22 chr15:57347600-57373000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr15:57347600-57373200 Weak transcription Fetal Intestine Large intestine
24 chr15:57348200-57361800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr15:57348600-57356800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr15:57348800-57355000 Enhancers Osteobl bone
27 chr15:57349000-57354400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr15:57349200-57353800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr15:57349200-57355400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr15:57349200-57356600 Enhancers Brain Substantia Nigra brain
31 chr15:57349400-57351400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr15:57349600-57351400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr15:57349600-57359800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr15:57349800-57351200 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr15:57349800-57351200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr15:57349800-57357800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr15:57349800-57363800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr15:57349800-57366600 Weak transcription Psoas Muscle Psoas
39 chr15:57350000-57351400 Weak transcription H1 Cell Line embryonic stem cell
40 chr15:57350000-57351400 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr15:57350000-57351400 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr15:57350000-57351400 Weak transcription Thymus Thymus
43 chr15:57350000-57352800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr15:57350000-57353800 Enhancers HSMM muscle
45 chr15:57350000-57355000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr15:57350200-57351200 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr15:57350200-57351200 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr15:57350200-57351400 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr15:57350200-57351400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr15:57350200-57351400 Weak transcription iPS-20b Cell Line embryonic stem cell

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