Variant report
Variant | rs296405 |
---|---|
Chromosome Location | chr5:58891929-58891930 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:58883800-58894200 | Weak transcription | Aorta | Aorta |
2 | chr5:58884200-58892600 | Weak transcription | Rectal Smooth Muscle | rectum |
3 | chr5:58884200-58892600 | Weak transcription | Osteobl | bone |
4 | chr5:58884200-58893800 | Weak transcription | H1 Cell Line | embryonic stem cell |
5 | chr5:58884200-58894000 | Weak transcription | Right Atrium | heart |
6 | chr5:58884200-58894200 | Weak transcription | Liver | Liver |
7 | chr5:58884200-58902800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
8 | chr5:58884600-58892200 | Weak transcription | Small Intestine | intestine |
9 | chr5:58884600-58892600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
10 | chr5:58884600-58893800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
11 | chr5:58885000-58892200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
12 | chr5:58885000-58894200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
13 | chr5:58885200-58892400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
14 | chr5:58885200-58892800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
15 | chr5:58885400-58892200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
16 | chr5:58885400-58892600 | Weak transcription | HUVEC | blood vessel |
17 | chr5:58886800-58892800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
18 | chr5:58887000-58892600 | Weak transcription | HMEC | breast |
19 | chr5:58887000-58894200 | Weak transcription | Fetal Intestine Large | intestine |
20 | chr5:58887000-58894200 | Weak transcription | GM12878-XiMat | blood |
21 | chr5:58887400-58894000 | Weak transcription | Brain Substantia Nigra | brain |
22 | chr5:58888000-58892200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
23 | chr5:58888200-58892200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
24 | chr5:58888200-58892600 | Weak transcription | Duodenum Mucosa | Duodenum |
25 | chr5:58888200-58892600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
26 | chr5:58888200-58892800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
27 | chr5:58888200-58893000 | Weak transcription | Fetal Lung | lung |
28 | chr5:58888200-58894000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
29 | chr5:58888200-58894200 | Weak transcription | Psoas Muscle | Psoas |
30 | chr5:58888400-58892200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
31 | chr5:58888400-58892600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
32 | chr5:58888400-58892600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
33 | chr5:58888400-58892600 | Weak transcription | HSMM | muscle |
34 | chr5:58888400-58893000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
35 | chr5:58888400-58894000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
36 | chr5:58888400-58894200 | Weak transcription | Colon Smooth Muscle | Colon |
37 | chr5:58888800-58892400 | Weak transcription | NHEK | skin |
38 | chr5:58889600-58892200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
39 | chr5:58889600-58892800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
40 | chr5:58889600-58894200 | Weak transcription | Brain Angular Gyrus | brain |
41 | chr5:58889800-58892600 | Weak transcription | Hela-S3 | cervix |
42 | chr5:58889800-58894200 | Weak transcription | Fetal Intestine Small | intestine |
43 | chr5:58890000-58892600 | Weak transcription | Stomach Mucosa | stomach |
44 | chr5:58891600-58892200 | Weak transcription | A549 | lung |
45 | chr5:58891600-58892800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
46 | chr5:58891600-58892800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
47 | chr5:58891600-58893800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |