Variant report

Variant	rs296633
Chromosome Location	chr9:93844478-93844479
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs296631	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs296632	0.84[ASN][1000 genomes]
rs296634	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs296635	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs296636	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs296638	1.00[ASN][1000 genomes]
rs2986638	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs435940	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs452953	0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:93841000-93847800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr9:93841200-93847800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr9:93841400-93846200	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr9:93841400-93846200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr9:93841600-93849600	Weak transcription	Fetal Intestine Small	intestine
6	chr9:93843000-93849000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr9:93844000-93846400	Weak transcription	H9 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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