Variant report

Variant	rs2967072
Chromosome Location	chr5:36398377-36398378
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10213770	0.83[AFR][1000 genomes]
rs2937533	0.81[AFR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2937534	0.81[AFR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2937535	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2967076	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2967077	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2967078	0.93[ASN][1000 genomes]
rs2967080	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2967081	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36391200-36403200	Weak transcription	Placenta	Placenta
2	chr5:36391800-36400600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr5:36393800-36403600	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr5:36394000-36402600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr5:36394000-36402800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr5:36394800-36402800	Weak transcription	HSMM	muscle
7	chr5:36396400-36401600	Weak transcription	Primary B cells from peripheral blood	blood
8	chr5:36396600-36398400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr5:36396600-36398400	Enhancers	Colon Smooth Muscle	Colon
10	chr5:36396800-36398400	Enhancers	Muscle Satellite Cultured Cells	--
11	chr5:36396800-36398400	Enhancers	HepG2	liver
12	chr5:36397200-36398400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr5:36397200-36398400	Enhancers	Rectal Smooth Muscle	rectum
14	chr5:36397400-36398400	Enhancers	Liver	Liver
15	chr5:36397800-36398400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr5:36397800-36398400	Enhancers	Fetal Lung	lung
17	chr5:36398000-36398400	Enhancers	Osteobl	bone
18	chr5:36398000-36398600	Enhancers	NHDF-Ad	bronchial
19	chr5:36398200-36398400	Enhancers	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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