Variant report

Variant	rs2967076
Chromosome Location	chr5:36407399-36407400
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs2937533	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2937534	0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2937535	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2967072	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2967077	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2967078	0.83[AFR][1000 genomes];0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2967080	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2967081	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58283682	0.86[AFR][1000 genomes]
rs73748608	0.82[AFR][1000 genomes]
rs73748619	0.82[AFR][1000 genomes]
rs73748623	0.82[AFR][1000 genomes]
rs73748660	0.86[AFR][1000 genomes]
rs73748661	0.86[AFR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36405000-36407400	Weak transcription	NH-A	brain
2	chr5:36405200-36407400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr5:36405200-36407400	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr5:36405200-36407400	Weak transcription	Osteobl	bone
5	chr5:36405800-36408400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr5:36406800-36408200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr5:36406800-36408200	Enhancers	HSMM	muscle
8	chr5:36407000-36408200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr5:36407000-36408200	Enhancers	NHDF-Ad	bronchial

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links