Variant report
| Variant | rs2967959 |
|---|---|
| Chromosome Location | chr6:56612940-56612941 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:56593200-56621200 | Weak transcription | Fetal Muscle Leg | muscle |
| 2 | chr6:56605000-56613400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 3 | chr6:56605600-56614600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr6:56606600-56614000 | Enhancers | Placenta Amnion | Placenta Amnion |
| 5 | chr6:56606600-56617600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 6 | chr6:56607200-56614200 | Weak transcription | Gastric | stomach |
| 7 | chr6:56607200-56618200 | Weak transcription | Brain Germinal Matrix | brain |
| 8 | chr6:56607600-56620600 | Weak transcription | Fetal Intestine Small | intestine |
| 9 | chr6:56608000-56613800 | Weak transcription | NH-A | brain |
| 10 | chr6:56608200-56614600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 11 | chr6:56608200-56621000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 12 | chr6:56608400-56614200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 13 | chr6:56608400-56614600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 14 | chr6:56608600-56614400 | Weak transcription | NHDF-Ad | bronchial |
| 15 | chr6:56608600-56618000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 16 | chr6:56609200-56617600 | Enhancers | HMEC | breast |
| 17 | chr6:56609200-56619200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 18 | chr6:56609800-56614800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 19 | chr6:56610000-56614000 | Weak transcription | Stomach Mucosa | stomach |
| 20 | chr6:56610000-56614200 | Weak transcription | NHLF | lung |
| 21 | chr6:56610600-56614200 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 22 | chr6:56610800-56613600 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 23 | chr6:56611600-56625800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 24 | chr6:56611800-56614600 | Weak transcription | Esophagus | oesophagus |
| 25 | chr6:56611800-56616200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 26 | chr6:56612000-56613600 | Genic enhancers | HSMM | muscle |
| 27 | chr6:56612000-56614000 | Weak transcription | Right Ventricle | heart |
| 28 | chr6:56612000-56614600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 29 | chr6:56612000-56614600 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 30 | chr6:56612000-56616400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 31 | chr6:56612200-56613000 | Weak transcription | Colon Smooth Muscle | Colon |
| 32 | chr6:56612200-56613600 | Weak transcription | A549 | lung |
| 33 | chr6:56612200-56613800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 34 | chr6:56612200-56613800 | Weak transcription | Brain Anterior Caudate | brain |
| 35 | chr6:56612200-56613800 | Weak transcription | Placenta | Placenta |
| 36 | chr6:56612200-56613800 | Weak transcription | Left Ventricle | heart |
| 37 | chr6:56612200-56613800 | Weak transcription | Psoas Muscle | Psoas |
| 38 | chr6:56612200-56614000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 39 | chr6:56612200-56614200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 40 | chr6:56612200-56614200 | Weak transcription | GM12878-XiMat | blood |
| 41 | chr6:56612200-56614400 | Weak transcription | Brain Hippocampus Middle | brain |
| 42 | chr6:56612200-56614400 | Weak transcription | HSMMtube | muscle |
| 43 | chr6:56612200-56614600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 44 | chr6:56612200-56614600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 45 | chr6:56612200-56614600 | Weak transcription | Brain Angular Gyrus | brain |
| 46 | chr6:56612200-56614600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 47 | chr6:56612200-56614600 | Weak transcription | Fetal Heart | heart |
| 48 | chr6:56612200-56614600 | Weak transcription | Right Atrium | heart |
| 49 | chr6:56612200-56616200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 50 | chr6:56612200-56616600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
