Variant report

Variant rs2975039
Chromosome Location chr6:29926379-29926380
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29913400-29932200 Weak transcription Brain Anterior Caudate brain
2 chr6:29913400-29932600 Weak transcription Brain Substantia Nigra brain
3 chr6:29913800-29932200 Weak transcription Small Intestine intestine
4 chr6:29914000-29932200 Weak transcription Colon Smooth Muscle Colon
5 chr6:29914600-29932200 Weak transcription Colonic Mucosa Colon
6 chr6:29914800-29932200 Weak transcription Right Ventricle heart
7 chr6:29915400-29931800 Weak transcription Fetal Thymus thymus
8 chr6:29915600-29932000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr6:29916400-29926400 Weak transcription GM12878-XiMat blood
10 chr6:29916800-29928200 Weak transcription HepG2 liver
11 chr6:29916800-29930000 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr6:29916800-29932200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr6:29916800-29932200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr6:29916800-29932200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr6:29916800-29933000 Weak transcription Esophagus oesophagus
16 chr6:29916800-29933000 Weak transcription Pancreas Pancrea
17 chr6:29916800-29933200 Weak transcription Lung lung
18 chr6:29916800-29940200 Weak transcription Gastric stomach
19 chr6:29917000-29926800 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr6:29917000-29931800 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr6:29917200-29932000 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr6:29917200-29932200 Weak transcription Liver Liver
23 chr6:29917200-29932200 Weak transcription Brain Hippocampus Middle brain
24 chr6:29917400-29927400 Weak transcription Fetal Muscle Leg muscle
25 chr6:29917800-29926400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr6:29917800-29932200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr6:29918000-29926600 Weak transcription Primary B cells from peripheral blood blood
28 chr6:29918000-29926600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr6:29918000-29932000 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr6:29918000-29932200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr6:29918000-29932200 Weak transcription Fetal Intestine Small intestine
32 chr6:29918200-29926600 Weak transcription Primary monocytes fromperipheralblood blood
33 chr6:29918200-29931800 Weak transcription Primary T cells from cord blood blood
34 chr6:29918400-29927400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr6:29919000-29926800 Weak transcription Primary B cells from cord blood blood
36 chr6:29920400-29932200 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr6:29921800-29929400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr6:29921800-29929600 Weak transcription Psoas Muscle Psoas
39 chr6:29921800-29932200 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr6:29922000-29929600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr6:29922400-29927600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr6:29924600-29932200 Weak transcription Left Ventricle heart
43 chr6:29924600-29932200 Weak transcription Right Atrium heart
44 chr6:29924800-29932200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr6:29924800-29933000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr6:29925600-29926400 Enhancers Primary neutrophils fromperipheralblood blood
47 chr6:29926000-29926400 Enhancers Fetal Adrenal Gland Adrenal Gland
48 chr6:29926000-29926600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr6:29926000-29927000 Enhancers Monocytes-CD14+_RO01746 blood
50 chr6:29926000-29927200 Enhancers Spleen Spleen

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